115287

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1486262..1486791 Replicon chromosome
Accession NZ_CP034111
Organism Staphylococcus epidermidis strain CDC120

Toxin (Protein)


Gene name mazF Uniprot ID Q5HME7
Locus tag EH162_RS07490 Protein ID WP_001829891.1
Coordinates 1486429..1486791 (+) Length 121 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID Q5HME6
Locus tag EH162_RS07485 Protein ID WP_001829931.1
Coordinates 1486262..1486432 (+) Length 57 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EH162_RS07460 1482087..1482566 + 480 WP_001829909.1 PH domain-containing protein -
EH162_RS07465 1482559..1484064 + 1506 WP_001829976.1 PH domain-containing protein -
EH162_RS07470 1484051..1484560 + 510 WP_001829888.1 PH domain-containing protein -
EH162_RS07475 1484608..1484961 + 354 WP_001829915.1 holo-ACP synthase -
EH162_RS07480 1485027..1486175 + 1149 WP_001829972.1 alanine racemase -
EH162_RS07485 1486262..1486432 + 171 WP_001829931.1 type II toxin-antitoxin system antitoxin MazE Antitoxin
EH162_RS07490 1486429..1486791 + 363 WP_001829891.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin
EH162_RS07495 1487137..1488138 + 1002 WP_001829902.1 PP2C family protein-serine/threonine phosphatase -
EH162_RS07500 1488238..1488564 + 327 WP_001829952.1 anti-sigma factor antagonist -
EH162_RS07505 1488566..1489045 + 480 WP_001829903.1 anti-sigma B factor RsbW -
EH162_RS07510 1489020..1489790 + 771 WP_002440602.1 RNA polymerase sigma factor SigB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(1-112)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 121 a.a.        Molecular weight: 13497.65 Da        Isoelectric Point: 9.9522

>T115287 WP_001829891.1 NZ_CP034111:1486429-1486791 [Staphylococcus epidermidis]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTFLSESKMIEVDNALDISLGLNNFDHHKS

Download         Length: 363 bp

>T115287 NZ_CP034111:1486429-1486791 [Staphylococcus epidermidis]
ATGATTAGAAGAGGAGATGTTTATTTAGCGGATTTATCACCAGTTCAAGGGTCTGAACAAGGGGGAGTGAGACCTGTAGT
TATCATTCAAAATGATACTGGTAATAAATATAGTCCAACTGTAATTGTAGCTGCGATTACTGGTAGGATTAATAAAGCGA
AAATACCAACCCACGTAGAAATTGAAAAGAAAAAGTATAAATTAGACAAAGATTCAGTTATTCTTCTTGAACAAATTAGA
ACACTAGATAAAAAGCGTTTAAAAGAAAAATTAACATTTTTATCAGAGAGTAAAATGATAGAGGTTGATAATGCCTTAGA
TATTAGTTTGGGATTAAATAACTTTGATCATCATAAATCTTAA

Antitoxin


Download         Length: 57 a.a.        Molecular weight: 6289.92 Da        Isoelectric Point: 4.1920

>AT115287 WP_001829931.1 NZ_CP034111:1486262-1486432 [Staphylococcus epidermidis]
MLSFNQNRNHSLEQSLKEGYAQMADLNLSLATEAFPIECEACDCNESHLISNSKNE

Download         Length: 171 bp

>AT115287 NZ_CP034111:1486262-1486432 [Staphylococcus epidermidis]
ATGTTATCTTTTAATCAAAATAGAAACCACAGTCTTGAACAATCTTTAAAAGAAGGTTATGCACAAATGGCCGATTTAAA
CCTCTCCCTAGCAACAGAAGCTTTTCCGATAGAGTGTGAAGCTTGTGATTGCAATGAATCACATTTAATATCTAATTCAA
AGAATGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2G7HWR0

Antitoxin

Source ID Structure
AlphaFold DB A0A0N1EF65

References