Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 3232093..3232443 Replicon chromosome
Accession NZ_CP033201
Organism Xanthomonas oryzae pv. oryzae strain BXO1

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag BXO1_RS16070 Protein ID WP_011257368.1
Coordinates 3232093..3232227 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag BXO1_RS16075 Protein ID WP_011407410.1
Coordinates 3232291..3232443 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BXO1_RS16055 (BXO1_015995) 3229107..3230051 - 945 WP_027704118.1 MBL fold metallo-hydrolase -
BXO1_RS16060 (BXO1_016000) 3230182..3231471 - 1290 WP_011257370.1 tryptophan--tRNA ligase -
BXO1_RS16065 (BXO1_016005) 3231640..3231849 - 210 WP_011407411.1 CsbD family protein -
BXO1_RS16070 (BXO1_016010) 3232093..3232227 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
BXO1_RS16075 (BXO1_016015) 3232291..3232443 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
BXO1_RS16080 (BXO1_016020) 3232551..3233474 - 924 WP_011407409.1 arginase -
BXO1_RS25795 3233796..3234014 + 219 Protein_2882 hypothetical protein -
BXO1_RS16085 (BXO1_016025) 3234006..3234470 + 465 Protein_2883 hypothetical protein -
BXO1_RS25800 3234467..3235009 + 543 Protein_2884 GTPase -
BXO1_RS16105 (BXO1_016045) 3235489..3236172 + 684 WP_011257363.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T113391 WP_011257368.1 NZ_CP033201:c3232227-3232093 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T113391 NZ_CP033201:c3232227-3232093 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT113391 WP_011407410.1 NZ_CP033201:c3232443-3232291 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT113391 NZ_CP033201:c3232443-3232291 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References