113369

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 450088..450438 Replicon chromosome
Accession NZ_CP033193
Organism Xanthomonas oryzae pv. oryzae strain JW11089

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag EBA19_RS02265 Protein ID WP_011257368.1
Coordinates 450304..450438 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag EBA19_RS02260 Protein ID WP_011407410.1
Coordinates 450088..450240 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EBA19_RS02230 446359..447042 - 684 WP_011257363.1 dTMP kinase -
EBA19_RS02240 447522..447818 - 297 WP_011257364.1 hypothetical protein -
EBA19_RS02245 447825..448064 - 240 WP_011257365.1 hypothetical protein -
EBA19_RS02250 448061..448735 - 675 WP_011257366.1 hypothetical protein -
EBA19_RS02255 449057..449980 + 924 WP_011407409.1 arginase -
EBA19_RS02260 450088..450240 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
EBA19_RS02265 450304..450438 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
EBA19_RS02270 450682..450891 + 210 WP_011407411.1 CsbD family protein -
EBA19_RS02275 451060..452349 + 1290 WP_011257370.1 tryptophan--tRNA ligase -
EBA19_RS02280 452402..453424 + 1023 WP_011257371.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T113369 WP_011257368.1 NZ_CP033193:450304-450438 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T113369 NZ_CP033193:450304-450438 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT113369 WP_011407410.1 NZ_CP033193:450088-450240 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT113369 NZ_CP033193:450088-450240 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References