113313

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4260097..4260458 Replicon chromosome
Accession NZ_CP033171
Organism Xanthomonas oryzae pv. oryzae strain T19

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag EBA15_RS20545 Protein ID WP_011257368.1
Coordinates 4260097..4260231 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag EBA15_RS20550 Protein ID WP_011407410.1
Coordinates 4260306..4260458 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EBA15_RS20530 4257114..4258136 - 1023 WP_165403720.1 MBL fold metallo-hydrolase -
EBA15_RS20535 4258189..4259478 - 1290 WP_024744479.1 tryptophan--tRNA ligase -
EBA15_RS20540 4259647..4259856 - 210 WP_024744478.1 CsbD family protein -
EBA15_RS20545 4260097..4260231 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
EBA15_RS20550 4260306..4260458 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
EBA15_RS20555 4260566..4261489 - 924 WP_053512953.1 arginase -
EBA15_RS20560 4261811..4262476 + 666 WP_024744476.1 hypothetical protein -
EBA15_RS20565 4262473..4263015 + 543 WP_024744475.1 GTPase -
EBA15_RS20575 4263531..4264214 + 684 WP_024744474.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T113313 WP_011257368.1 NZ_CP033171:c4260231-4260097 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T113313 NZ_CP033171:c4260231-4260097 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT113313 WP_011407410.1 NZ_CP033171:c4260458-4260306 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT113313 NZ_CP033171:c4260458-4260306 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References