Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 219171..219934 Replicon chromosome
Accession NZ_CP033144
Organism Vibrio owensii strain V180403

Toxin (Protein)


Gene name ataT Uniprot ID A0A919BFZ0
Locus tag D0856_RS01040 Protein ID WP_023584043.1
Coordinates 219171..219677 (-) Length 169 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag D0856_RS01045 Protein ID WP_000212004.1
Coordinates 219668..219934 (-) Length 89 a.a.

Genomic Context

D0856_RS01010D0856_RS01015D0856_RS01020D0856_RS01025D0856_RS01030D0856_RS01035D0856_RS01050D0856_RS01055D0856_RS01000D0856_RS01005D0856_RS01040D0856_RS01045
Location: 215024..215305 (282 bp)
Type: Others
Protein ID: WP_000433889.1
Location: 215302..215928 (627 bp)
Type: Others
Protein ID: WP_000667170.1
Location: 215912..216808 (897 bp)
Type: Others
Protein ID: WP_086597854.1
Location: 216811..218100 (1290 bp)
Type: Others
Protein ID: WP_086597841.1
Location: 218175..218747 (573 bp)
Type: Others
Protein ID: WP_001944091.1
Location: 218744..219130 (387 bp)
Type: Others
Protein ID: WP_023584042.1
Location: 220750..223479 (2730 bp)
Type: Others
Protein ID: WP_122067049.1
Location: 223476..224585 (1110 bp)
Type: Others
Protein ID: WP_122067050.1
Location: 214245..214523 (279 bp)
Type: Others
Protein ID: WP_054103798.1
Location: 214520..214843 (324 bp)
Type: Others
Protein ID: WP_054103799.1
Location: 219171..219677 (507 bp)
Type: Toxin
Protein ID: WP_023584043.1
Location: 219668..219934 (267 bp)
Type: Antitoxin
Protein ID: WP_000212004.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
D0856_RS01000214245..214523-279WP_054103798.1helix-turn-helix domain-containing protein-
D0856_RS01005214520..214843-324WP_054103799.1type II toxin-antitoxin system RelE/ParE family toxin-
D0856_RS01010215024..215305+282WP_000433889.1type IV conjugative transfer system protein TraL-
D0856_RS01015215302..215928+627WP_000667170.1hypothetical protein-
D0856_RS01020215912..216808+897WP_086597854.1type-F conjugative transfer system secretin TraK-
D0856_RS01025216811..218100+1290WP_086597841.1TraB/VirB10 family protein-
D0856_RS01030218175..218747+573WP_001944091.1type IV conjugative transfer system lipoprotein TraV-
D0856_RS01035218744..219130+387WP_023584042.1hypothetical protein-
D0856_RS01040219171..219677-507WP_023584043.1GNAT family N-acetyltransferaseToxin
D0856_RS01045219668..219934-267WP_000212004.1DUF1778 domain-containing proteinAntitoxin
D0856_RS01050220750..223479+2730WP_122067049.1AAA family ATPase-
D0856_RS01055223476..224585+1110WP_122067050.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(42-146)

Antitoxin

Vibrio phage ICP1, Orf50

(8-83)


Sequences

Toxin        


Download         Length: 169 a.a.        Molecular weight: 18278.00 Da        Isoelectric Point: 7.2132

>T113247 WP_023584043.1 NZ_CP033144:c219677-219171 [Vibrio owensii]
MGISAPTLLTDEHQLNAFQCGIEELDTWLRKQALKSQKRGTARVYVVNDTDAHQVVGYYAIAMGSVSREQAFSSLRRNSP
DPIPMVILARLGVDNAYQGQGIAAGLLKDCIIRSVQAMNAVGGAGILVHAIDGSAQTFYKKFGFKESTFDPLVLMARICD
IEKSLSID

Download         Length: 507 bp

>T113247 NZ_CP033144:c219677-219171 [Vibrio owensii]
TTGGGAATAAGTGCACCAACCCTCCTCACTGATGAGCACCAGCTTAATGCCTTTCAATGTGGCATTGAAGAGCTCGATAC
TTGGTTAAGAAAACAGGCGTTAAAGAGTCAAAAGCGGGGAACCGCGAGGGTGTATGTGGTCAATGACACTGACGCCCATC
AAGTGGTCGGGTACTATGCCATTGCCATGGGATCAGTTTCCAGAGAGCAAGCTTTTAGTTCATTAAGAAGAAATAGTCCA
GATCCCATTCCCATGGTGATTCTAGCCAGACTTGGAGTAGATAACGCCTATCAAGGTCAAGGCATTGCGGCAGGTCTTTT
AAAAGATTGTATCATTCGCTCAGTACAAGCAATGAACGCTGTCGGTGGAGCAGGAATCTTAGTCCATGCTATTGATGGTA
GTGCGCAAACGTTCTACAAGAAATTTGGCTTCAAAGAATCGACGTTTGATCCATTAGTACTCATGGCAAGGATCTGCGAT
ATCGAAAAATCATTGTCGATAGACTGA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9956.48 Da        Isoelectric Point: 5.8580

>AT113247 WP_000212004.1 NZ_CP033144:c219934-219668 [Vibrio owensii]
MATKTAPINMRVLPSVRDIIDAAASLKKVDRTVFIQQAALNEAHSILAEQRDFVLEAKAFEAFDNELRAEPQTLEGMKDL
FKRKAPWE

Download         Length: 267 bp

>AT113247 NZ_CP033144:c219934-219668 [Vibrio owensii]
ATGGCTACAAAGACAGCCCCAATCAACATGCGAGTACTGCCATCGGTAAGAGACATCATCGATGCCGCAGCAAGTTTAAA
AAAAGTTGATAGAACCGTGTTCATTCAGCAAGCAGCGCTCAATGAAGCGCATAGTATACTGGCAGAACAGCGGGATTTTG
TTCTAGAAGCAAAGGCTTTTGAAGCGTTTGATAACGAACTTCGTGCAGAGCCACAGACTCTTGAAGGTATGAAAGATCTG
TTTAAGAGGAAAGCGCCTTGGGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References