112490

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) paaR-paaA-parE/-
Location 3482238..3482716 Replicon chromosome
Accession NZ_CP032805
Organism Escherichia coli strain ERL05-0623

Toxin (Protein)


Gene name parE_1 Uniprot ID A0A891SFN9
Locus tag D8Z69_RS18295 Protein ID WP_001303876.1
Coordinates 3482429..3482716 (+) Length 96 a.a.

Antitoxin (Protein)


Gene name paaA Uniprot ID Q8XD67
Locus tag D8Z69_RS18290 Protein ID WP_000536233.1
Coordinates 3482238..3482429 (+) Length 64 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D8Z69_RS18255 3477642..3478412 - 771 WP_000450992.1 DUF1627 domain-containing protein -
D8Z69_RS18260 3478434..3479180 - 747 WP_000788751.1 ATP-binding protein -
D8Z69_RS18265 3479187..3480278 - 1092 WP_001205823.1 hypothetical protein -
D8Z69_RS18270 3480357..3480812 + 456 WP_000273724.1 hypothetical protein -
D8Z69_RS18275 3481019..3481444 - 426 WP_000693855.1 Rha family transcriptional regulator -
D8Z69_RS18280 3481428..3481700 - 273 WP_000887453.1 helix-turn-helix domain-containing protein -
D8Z69_RS18285 3481809..3482210 + 402 WP_000986592.1 helix-turn-helix domain-containing protein -
D8Z69_RS18290 3482238..3482429 + 192 WP_000536233.1 hypothetical protein Antitoxin
D8Z69_RS18295 3482429..3482716 + 288 WP_001303876.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
D8Z69_RS18305 3482994..3483149 + 156 WP_000379575.1 DUF1391 family protein -
D8Z69_RS18310 3483291..3483680 + 390 WP_000394511.1 hypothetical protein -
D8Z69_RS18315 3483867..3484052 - 186 WP_001133046.1 hypothetical protein -
D8Z69_RS18325 3484626..3484814 + 189 WP_000413705.1 cell division inhibition protein DicB -
D8Z69_RS18330 3484811..3485002 + 192 WP_001098307.1 DUF1482 family protein -
D8Z69_RS18335 3485096..3487567 + 2472 WP_000034474.1 exonuclease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-91)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 96 a.a.        Molecular weight: 10978.84 Da        Isoelectric Point: 10.1360

>T112490 WP_001303876.1 NZ_CP032805:3482429-3482716 [Escherichia coli]
MLPILWLPSARDDLRQIITYIAKENPPAARRLKIRIETSVLPLSEHPYLYPPSERVSGLREIVTHPNYIILYRVAASSIE
IVSVTHSRRQFPFSI

Download         Length: 288 bp

>T112490 NZ_CP032805:3482429-3482716 [Escherichia coli]
ATGTTACCCATTTTATGGCTACCGTCTGCTCGCGATGATTTGCGCCAGATCATAACTTACATCGCCAAGGAGAACCCACC
GGCAGCACGTAGACTAAAAATACGCATTGAAACATCGGTATTACCTCTATCTGAGCATCCGTACTTATATCCACCAAGCG
AACGGGTTTCTGGATTGAGAGAGATCGTGACCCACCCTAACTACATAATCCTGTACAGAGTAGCTGCTTCAAGCATTGAG
ATTGTAAGCGTGACACATTCTCGGCGACAATTTCCCTTCTCTATCTGA

Antitoxin


Download         Length: 64 a.a.        Molecular weight: 7025.80 Da        Isoelectric Point: 4.0270

>AT112490 WP_000536233.1 NZ_CP032805:3482238-3482429 [Escherichia coli]
MGTALSPIVSEFETTEQENSYNEWLRTKVTSSLADTRPAIPHDEVMAEMENLIAQIAVTNKSE

Download         Length: 192 bp

>AT112490 NZ_CP032805:3482238-3482429 [Escherichia coli]
ATGGGTACAGCCCTTTCTCCGATAGTTTCAGAATTCGAAACTACCGAACAAGAAAACAGTTACAACGAATGGTTGCGCAC
TAAAGTAACGTCAAGCCTTGCAGACACTCGCCCCGCAATTCCACATGACGAGGTAATGGCTGAAATGGAAAATCTTATTG
CTCAAATTGCTGTAACTAACAAGAGCGAGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References