Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) /Acetyltransf_4(toxin)
Location 1584645..1586051 Replicon chromosome
Accession NZ_CP032419
Organism Pseudomonas sp. K2W31S-8

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag D3880_RS07365 Protein ID WP_119892831.1
Coordinates 1584645..1585214 (+) Length 190 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag D3880_RS07370 Protein ID WP_119892832.1
Coordinates 1585218..1586051 (+) Length 278 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D3880_RS07355 1579753..1580574 + 822 WP_119892829.1 MerR family transcriptional regulator -
D3880_RS07360 1580796..1584272 - 3477 WP_119892830.1 hybrid sensor histidine kinase/response regulator -
D3880_RS07365 1584645..1585214 + 570 WP_119892831.1 GNAT family N-acetyltransferase Toxin
D3880_RS07370 1585218..1586051 + 834 WP_119892832.1 AraC family transcriptional regulator Antitoxin
D3880_RS07375 1586227..1586940 + 714 WP_119892833.1 AzlC family ABC transporter permease -
D3880_RS07380 1586940..1587269 + 330 WP_119892834.1 AzlD domain-containing protein -
D3880_RS07385 1587386..1589470 + 2085 WP_119892835.1 TonB-dependent siderophore receptor -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-146)

Antitoxin

(18-150)


Sequences


Toxin        


Download         Length: 190 a.a.        Molecular weight: 21415.65 Da        Isoelectric Point: 9.7696

>T111766 WP_119892831.1 NZ_CP032419:1584645-1585214 [Pseudomonas sp. K2W31S-8]
MFKPQLIALQRGALRLEPMVDGDIPALVELAEANRDELGYMSGPLRLDWYRSALNDQRNGLALPLCIRLGDRLVGTTRYA
EFLNTLPAAEIGWTWLERGQHGTGLNTTIKYLMLRHAFESWRMVRVQLKTAGSNLRSQRAIEKLGAVREGVLRNHRRLAD
GRLDDTVMYSITDGEWPAVKQQLEARFGA

Download         Length: 570 bp

>T111766 NZ_CP032419:1584645-1585214 [Pseudomonas sp. K2W31S-8]
ATGTTCAAGCCGCAATTGATCGCACTGCAGCGTGGCGCGCTGCGTCTGGAACCCATGGTCGATGGCGATATCCCGGCGCT
GGTGGAGCTGGCCGAGGCCAATCGCGACGAGTTGGGCTATATGAGCGGGCCGTTGCGCCTGGACTGGTATCGTAGCGCGC
TCAACGATCAGCGCAATGGCCTGGCCCTGCCACTGTGCATCCGCCTCGGTGATCGTCTGGTCGGCACCACGCGCTATGCC
GAGTTTCTCAACACCTTGCCGGCCGCCGAGATCGGTTGGACCTGGTTGGAGCGCGGCCAGCACGGCACCGGCCTGAACAC
CACGATCAAGTACCTGATGCTGCGCCATGCCTTCGAGAGCTGGCGCATGGTCCGTGTGCAGTTGAAAACCGCCGGCAGCA
ACCTGCGCTCGCAGCGCGCCATCGAGAAGCTCGGCGCGGTGCGCGAGGGTGTGCTGCGCAATCACCGGCGCCTGGCCGAC
GGCCGCCTGGACGACACCGTGATGTACAGCATTACCGACGGCGAGTGGCCGGCGGTGAAGCAGCAGCTGGAGGCGCGCTT
CGGCGCCTGA

Antitoxin


Download         Length: 278 a.a.        Molecular weight: 30657.22 Da        Isoelectric Point: 9.5211

>AT111766 WP_119892832.1 NZ_CP032419:1585218-1586051 [Pseudomonas sp. K2W31S-8]
MAAVDKERTRFWRAEGLGGVELLHARYIEQRFAPHVHEGFVFTVIEHGAQRFRHRGSEHLAPVGSMVLISPDEVHTGSKA
HEQGWRYRAFYPDIERVSGVLAELELGRNGLPSFAASVLQDPQMALVFIGLHRLLDSGASALQQQTAWREAILLLFQCHA
RIPAAPAPGQEPQAVVRAKELLASRLLAPPSLEELAAAVALSPFHFSRVFRRATGLPPHAWLQQRRLEQARTLLKQGCAP
LAVAMQLGFADQSHLSRQFKQAYGVAPGEYCKACGRS

Download         Length: 834 bp

>AT111766 NZ_CP032419:1585218-1586051 [Pseudomonas sp. K2W31S-8]
ATGGCGGCGGTCGATAAGGAGCGCACGCGCTTCTGGCGGGCTGAAGGGCTGGGTGGCGTCGAGTTGTTGCATGCGCGTTA
CATCGAGCAGCGTTTCGCCCCGCATGTGCACGAGGGGTTCGTCTTTACCGTGATCGAGCATGGCGCCCAGCGCTTTCGCC
ATCGCGGCAGCGAGCATCTGGCGCCGGTCGGCAGCATGGTGCTGATCAGTCCGGACGAGGTGCATACCGGCTCCAAGGCC
CATGAACAGGGCTGGCGCTACCGGGCCTTCTACCCGGATATCGAGCGGGTCAGCGGGGTGCTGGCGGAGCTCGAGTTGGG
GCGCAATGGCTTGCCGTCGTTCGCCGCCAGCGTGCTGCAGGACCCGCAGATGGCCCTGGTGTTTATCGGCCTGCACCGCC
TGCTGGACAGTGGCGCCAGCGCGTTGCAGCAGCAGACCGCCTGGCGCGAGGCGATTCTCCTGCTGTTCCAGTGCCATGCG
CGGATTCCCGCAGCGCCAGCGCCGGGGCAGGAGCCACAGGCCGTGGTGCGGGCCAAGGAATTGCTCGCCAGCCGCTTGCT
CGCGCCACCGTCGCTGGAGGAGTTGGCCGCCGCGGTGGCCTTGTCGCCGTTCCATTTCTCCCGGGTATTCCGCCGCGCCA
CCGGCCTGCCGCCGCATGCCTGGCTCCAGCAGCGCCGGCTGGAGCAGGCGCGGACGCTGCTCAAGCAGGGCTGCGCGCCA
CTGGCGGTGGCCATGCAGCTGGGCTTCGCCGACCAGAGCCACCTGAGCCGCCAGTTCAAGCAGGCTTACGGCGTGGCACC
CGGCGAATACTGCAAGGCCTGCGGCCGTTCGTAG

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References