Detailed information of TA system
Overview
TA module
| Type | IV | Classification (family/domain) | yeeUV (cbtA-cbeA)/CbtA-CbeA |
| Location | 44303..45138 | Replicon | chromosome |
| Accession | NZ_CP032078 | ||
| Organism | Escherichia coli strain CT30 | ||
Toxin (Protein)
| Gene name | yeeV | Uniprot ID | F4TIK8 |
| Locus tag | D2195_RS00225 | Protein ID | WP_000854694.1 |
| Coordinates | 44303..44680 (-) | Length | 126 a.a. |
Antitoxin (Protein)
| Gene name | yeeU | Uniprot ID | A0A8S7S1S5 |
| Locus tag | D2195_RS00230 | Protein ID | WP_065793167.1 |
| Coordinates | 44770..45138 (-) | Length | 123 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2195_RS00190 (39437) | 39437..39730 | - | 294 | WP_001297978.1 | protein YicS | - |
| D2195_RS00195 (39952) | 39952..40770 | + | 819 | WP_000779405.1 | lipoprotein NlpA | - |
| D2195_RS00200 (40774) | 40774..41697 | - | 924 | WP_000535959.1 | carboxylate/amino acid/amine transporter | - |
| D2195_RS00205 (41864) | 41864..42361 | - | 498 | WP_000509808.1 | hypothetical protein | - |
| D2195_RS00210 (42957) | 42957..43799 | - | 843 | WP_001696593.1 | DUF4942 domain-containing protein | - |
| D2195_RS00215 (43884) | 43884..44081 | - | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| D2195_RS00220 (44139) | 44139..44306 | - | 168 | Protein_45 | DUF5983 family protein | - |
| D2195_RS00225 (44303) | 44303..44680 | - | 378 | WP_000854694.1 | TA system toxin CbtA family protein | Toxin |
| D2195_RS00230 (44770) | 44770..45138 | - | 369 | WP_065793167.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin |
| D2195_RS00235 (45301) | 45301..45522 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| D2195_RS00240 (45585) | 45585..46061 | - | 477 | WP_001186710.1 | RadC family protein | - |
| D2195_RS00245 (46073) | 46073..46552 | - | 480 | WP_113837565.1 | antirestriction protein | - |
| D2195_RS00250 (46634) | 46634..47452 | - | 819 | WP_001175149.1 | DUF932 domain-containing protein | - |
| D2195_RS00255 (47542) | 47542..47775 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| D2195_RS00260 (47781) | 47781..48458 | - | 678 | WP_112042006.1 | hypothetical protein | - |
| D2195_RS00265 (48606) | 48606..49286 | - | 681 | WP_212408107.1 | WYL domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 126 a.a. Molecular weight: 14008.02 Da Isoelectric Point: 7.7293
>T111015 WP_000854694.1 NZ_CP032078:c44680-44303 [Escherichia coli]
MKTLPDTHVREASCCPSPVTIWQTLLTRLLDQHYGLALNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ
MKTLPDTHVREASCCPSPVTIWQTLLTRLLDQHYGLALNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ
Download Length: 378 bp
>T111015 NZ_CP032078:c44680-44303 [Escherichia coli]
ATGAAAACATTACCCGACACGCATGTACGGGAGGCATCGTGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGGTTACTGGACCAGCACTACGGCCTCGCGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AAGCGGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGTTCTCAGTTAATAAACAGTATTGATATCCTCCGGGCACGCCGGGCAACCGGCCTGATGACACGCGA
CAACTACAGAACGGTAAATAACATTACCCTGGGTAAACATCCGGGGGCGAAACAATGA
ATGAAAACATTACCCGACACGCATGTACGGGAGGCATCGTGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGGTTACTGGACCAGCACTACGGCCTCGCGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AAGCGGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGTTCTCAGTTAATAAACAGTATTGATATCCTCCGGGCACGCCGGGCAACCGGCCTGATGACACGCGA
CAACTACAGAACGGTAAATAACATTACCCTGGGTAAACATCCGGGGGCGAAACAATGA
Antitoxin
Download Length: 123 a.a. Molecular weight: 13555.50 Da Isoelectric Point: 6.6249
>AT111015 WP_065793167.1 NZ_CP032078:c45138-44770 [Escherichia coli]
VSDALSGTMLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCKADTLGSCGYVYMAVYPTPETKK
VSDALSGTMLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCKADTLGSCGYVYMAVYPTPETKK
Download Length: 369 bp
>AT111015 NZ_CP032078:c45138-44770 [Escherichia coli]
GTGTCAGACGCACTCTCCGGGACAATGCTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGT
TCAGCGATGCAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAGGTCTGACCTGCAAAGCCGACACCCTCGGCAGTTG
TGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAA
GTGTCAGACGCACTCTCCGGGACAATGCTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGT
TCAGCGATGCAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAGGTCTGACCTGCAAAGCCGACACCCTCGGCAGTTG
TGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|