Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 2841348..2841967 Replicon chromosome
Accession NZ_CP031800
Organism Klebsiella pneumoniae strain MSB1_8A-sc-2280397

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag D0887_RS14385 Protein ID WP_002892050.1
Coordinates 2841749..2841967 (+) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID J2DPF6
Locus tag D0887_RS14380 Protein ID WP_002892066.1
Coordinates 2841348..2841722 (+) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D0887_RS14370 2836500..2837693 + 1194 WP_004177236.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -
D0887_RS14375 2837716..2840862 + 3147 WP_002892069.1 multidrug efflux RND transporter permease subunit AcrB -
D0887_RS14380 2841348..2841722 + 375 WP_002892066.1 Hha toxicity modulator TomB Antitoxin
D0887_RS14385 2841749..2841967 + 219 WP_002892050.1 hemolysin expression modulator Hha Toxin
D0887_RS14390 2842130..2842696 + 567 WP_002892030.1 maltose O-acetyltransferase -
D0887_RS32080 2842668..2842808 - 141 WP_004147370.1 hypothetical protein -
D0887_RS14395 2842829..2843299 + 471 WP_002892026.1 YlaC family protein -
D0887_RS14400 2843274..2844725 - 1452 WP_064162152.1 PLP-dependent aminotransferase family protein -
D0887_RS14405 2844826..2845524 + 699 WP_004177238.1 GNAT family N-acetyltransferase -
D0887_RS14410 2845521..2845661 - 141 WP_002892018.1 type B 50S ribosomal protein L36 -
D0887_RS14415 2845661..2845924 - 264 WP_002892011.1 type B 50S ribosomal protein L31 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T110167 WP_002892050.1 NZ_CP031800:2841749-2841967 [Klebsiella pneumoniae]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

>T110167 NZ_CP031800:2841749-2841967 [Klebsiella pneumoniae]
ATGTCTGATAAGCCATTAACTAAAACAGACTATTTGATGCGCTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGCGT
CATTGAAAAAAATAAATATGAACTGTCTGATAATGAGCTGGCGGTATTTTACTCAGCTGCCGACCATCGTCTGGCGGAAC
TGACCATGAATAAGCTATACGATAAAATCCCGACCTCTGTCTGGAAATTTATCCGCTAA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14368.06 Da        Isoelectric Point: 4.8989

>AT110167 WP_002892066.1 NZ_CP031800:2841348-2841722 [Klebsiella pneumoniae]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYAEDNKLIAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp

>AT110167 NZ_CP031800:2841348-2841722 [Klebsiella pneumoniae]
ATGGACGAATACTCGCCAAAAAGACATGATATTGCACAGCTACGCTTTCTCTGCGAAACGCTGTATCATGACTGCCTTGC
AAACCTGGAAGAGAGCAACCATGGCTGGGTCAACGACCCGACGTCGGCTGTCAATCTCCAGTTAAATGAATTGATCGAGC
ACATTGCCACATTCGCTCTTAATTATAAAATTAAGTATGCAGAGGATAATAAGCTGATCGCTCAGGTTGACGAATATCTG
GACGACACTTTTACGTTGTTCAGTAACTACGGCATTAACTCTACGGATTTGCAAAAGTGGAAAAAATCCGGTAACCGACT
ATTTCGTTGCTTTGTCAACGCCAGCCGGGAAAACCCGGCCAGTCTATCGTGTTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GJ93

References