Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 1401759..1402267 Replicon chromosome
Accession NZ_CP031699
Organism Neisseria animalis strain ATCC 49930

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag D0T90_RS06505 Protein ID WP_123795615.1
Coordinates 1401759..1402019 (-) Length 87 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag D0T90_RS06510 Protein ID WP_123795614.1
Coordinates 1402016..1402267 (-) Length 84 a.a.

Genomic Context

D0T90_RS06490D0T90_RS06495D0T90_RS06500D0T90_RS06505D0T90_RS06510D0T90_RS06515D0T90_RS06520D0T90_RS06525
Location: 1397959..1399050 (1092 bp)
Type: Others
Protein ID: WP_123795618.1
Location: 1399121..1400416 (1296 bp)
Type: Others
Protein ID: WP_123795617.1
Location: 1400747..1401577 (831 bp)
Type: Others
Protein ID: WP_123795616.1
Location: 1401759..1402019 (261 bp)
Type: Toxin
Protein ID: WP_123795615.1
Location: 1402016..1402267 (252 bp)
Type: Antitoxin
Protein ID: WP_123795614.1
Location: 1402521..1402721 (201 bp)
Type: Others
Protein ID: WP_123795613.1
Location: 1402705..1404783 (2079 bp)
Type: Others
Protein ID: WP_123795612.1
Location: 1405385..1406248 (864 bp)
Type: Others
Protein ID: WP_123795611.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
D0T90_RS064901397959..1399050+1092WP_123795618.1redox-regulated ATPase YchF-
D0T90_RS064951399121..1400416+1296WP_123795617.1tyrosine--tRNA ligase-
D0T90_RS065001400747..1401577+831WP_123795616.1CoA ester lyase-
D0T90_RS065051401759..1402019-261WP_123795615.1Txe/YoeB family addiction module toxinToxin
D0T90_RS065101402016..1402267-252WP_123795614.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
D0T90_RS065151402521..1402721-201WP_123795613.1putative selenoprotein-
D0T90_RS065201402705..1404783-2079WP_123795612.1carbon starvation protein A-
D0T90_RS065251405385..1406248-864WP_123795611.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(1-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(3-74)


Sequences

Toxin        


Download         Length: 87 a.a.        Molecular weight: 10375.71 Da        Isoelectric Point: 7.3970

>T109888 WP_123795615.1 NZ_CP031699:c1402019-1401759 [Neisseria animalis]
MMLHFTDDAWEDYQYWLQTDKAVLKRINTIIQDMQRNPFDGIGKPEPLRHSLSGYYSRRINQEHRIVYRADDSGIWLISL
RFHYSG

Download         Length: 261 bp

>T109888 NZ_CP031699:c1402019-1401759 [Neisseria animalis]
ATGATGTTGCACTTTACCGATGACGCATGGGAGGATTACCAATACTGGCTGCAAACAGATAAAGCTGTTCTCAAACGTAT
CAATACCATTATTCAAGACATGCAGCGCAATCCGTTTGACGGCATTGGCAAACCCGAACCGCTGCGCCACAGCTTGAGCG
GTTATTACAGCCGCCGCATCAATCAGGAACACCGCATTGTTTACCGAGCCGACGACAGCGGTATTTGGTTGATTTCTCTG
CGTTTCCATTATTCCGGCTAG

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 8878.15 Da        Isoelectric Point: 4.7023

>AT109888 WP_123795614.1 NZ_CP031699:c1402267-1402016 [Neisseria animalis]
MYAVHASDFRKNMAATLDRVADNAEPVLITRSGASAAVLLDINEYNALIETAYLLSNPAMAARLAKGIAEVEAGKTSIRE
LVE

Download         Length: 252 bp

>AT109888 NZ_CP031699:c1402267-1402016 [Neisseria animalis]
ATGTATGCCGTCCACGCTTCCGATTTCCGCAAAAACATGGCAGCCACGCTTGACCGCGTTGCCGACAACGCCGAACCAGT
ACTGATTACCCGAAGCGGCGCATCTGCCGCTGTTTTGCTCGACATCAACGAATACAACGCGCTGATCGAAACGGCTTATC
TGCTTTCCAATCCCGCAATGGCGGCACGTTTGGCAAAAGGTATTGCCGAAGTGGAGGCAGGCAAAACCAGTATTCGGGAA
TTGGTTGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References