Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 1800136..1800622 Replicon chromosome
Accession NZ_CP031628
Organism Streptococcus pyogenes strain MGAS28330

Toxin (Protein)


Gene name relE Uniprot ID Q48QR0
Locus tag DZS39_RS09035 Protein ID WP_014407961.1
Coordinates 1800136..1800405 (-) Length 90 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A660A1J7
Locus tag DZS39_RS09040 Protein ID WP_014407962.1
Coordinates 1800395..1800622 (-) Length 76 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DZS39_RS09020 1795631..1796704 + 1074 WP_011285298.1 DUF4097 family beta strand repeat protein -
DZS39_RS09025 1796821..1799094 - 2274 WP_021340697.1 YhgE/Pip domain-containing protein -
DZS39_RS09030 1799229..1799762 + 534 WP_010922785.1 TetR/AcrR family transcriptional regulator -
DZS39_RS09035 1800136..1800405 - 270 WP_014407961.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
DZS39_RS09040 1800395..1800622 - 228 WP_014407962.1 hypothetical protein Antitoxin
DZS39_RS09045 1800775..1801146 - 372 WP_011285302.1 DUF1492 domain-containing protein -
DZS39_RS09050 1801136..1801483 - 348 WP_011285303.1 DUF1492 domain-containing protein -
DZS39_RS09055 1801764..1802009 - 246 WP_011285304.1 hypothetical protein -
DZS39_RS09060 1801984..1802259 - 276 WP_014407964.1 hypothetical protein -
DZS39_RS09065 1802249..1802587 - 339 WP_030126557.1 replication protein -
DZS39_RS09070 1802629..1802895 - 267 WP_011285307.1 hypothetical protein -
DZS39_RS09075 1802892..1803680 - 789 WP_011285308.1 hypothetical protein -
DZS39_RS09450 1803771..1803929 - 159 WP_011285309.1 hypothetical protein -
DZS39_RS09080 1803943..1804188 - 246 WP_011285310.1 hypothetical protein -
DZS39_RS09085 1804184..1804510 - 327 Protein_1683 hypothetical protein -
DZS39_RS09455 1804512..1804685 - 174 WP_011285312.1 hypothetical protein -
DZS39_RS09090 1804691..1804864 - 174 WP_000694580.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(6-87)

Antitoxin

Protein of unknown function DUF6290

(1-71)


Sequences

Toxin        


Download         Length: 90 a.a.        Molecular weight: 10497.50 Da        Isoelectric Point: 10.5027

>T109580 WP_014407961.1 NZ_CP031628:c1800405-1800136 [Streptococcus pyogenes]
MTYKLVVSDEVKKQLKKMDKHVGLMLAKDMKKRLDGLNNPRQFGKALTGQYKGLWRYRVGNYRVICDIVDNEMIILALEV
GHRKEIYKR

Download         Length: 270 bp

>T109580 NZ_CP031628:c1800405-1800136 [Streptococcus pyogenes]
ATGACTTATAAGCTAGTGGTGAGTGATGAAGTCAAGAAGCAACTCAAAAAGATGGATAAACATGTAGGGCTTATGTTAGC
CAAAGACATGAAGAAACGACTTGACGGGTTAAATAATCCTAGACAATTTGGAAAAGCCCTCACAGGTCAATATAAAGGAC
TTTGGCGCTATCGTGTTGGTAATTATCGGGTGATTTGTGACATTGTGGATAATGAAATGATTATCCTTGCTTTGGAAGTT
GGACACAGGAAAGAGATATACAAGCGCTAG

Antitoxin


Download         Length: 76 a.a.        Molecular weight: 8641.63 Da        Isoelectric Point: 3.9607

>AT109580 WP_014407962.1 NZ_CP031628:c1800622-1800395 [Streptococcus pyogenes]
MAMVSLRLNSAEEELFRSYATHTGKTLSELFKTALAQQIEDQLDYETGIQALKRFEENPITYSIDDLIEELENDL

Download         Length: 228 bp

>AT109580 NZ_CP031628:c1800622-1800395 [Streptococcus pyogenes]
ATGGCAATGGTATCATTAAGACTGAACAGCGCAGAGGAAGAACTTTTCAGAAGCTACGCTACACACACAGGCAAAACATT
ATCTGAATTATTCAAGACAGCACTAGCACAACAAATTGAAGATCAATTGGACTATGAAACAGGTATTCAAGCTTTAAAAC
GCTTTGAAGAAAATCCCATAACTTATTCTATCGATGATTTAATTGAGGAGTTGGAAAATGACTTATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A660A202

Antitoxin

Source ID Structure
AlphaFold DB A0A660A1J7

References