Detailed information of TA system TA108302

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): /RES-TIGR02293
• Location: 2966051..2966961
• Replicon: chromosome
• Accession: NZ_CP031009
• Organism: Alcanivorax sp. ALC70

Toxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: ASALC70_RS15745
• Protein ID: WP_161384079.1
• Coordinates: 2966497..2966961 (+)
• Length: 155 a.a.

Antitoxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: ASALC70_RS15740
• Protein ID: WP_161384163.1
• Coordinates: 2966051..2966500 (+)
• Length: 150 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
ASALC70_RS15715 (ASALC70_03196)	2961480..2962298	+	819	WP_161384076.1	LysR family transcriptional regulator	-
ASALC70_RS15720 (ASALC70_03197)	2962435..2962770	+	336	WP_260547742.1	NnrS family protein	-
ASALC70_RS15725 (ASALC70_03198)	2962722..2963927	-	1206	WP_260547470.1	ISL3 family transposase	-
ASALC70_RS15730 (ASALC70_03199)	2964278..2965069	+	792	WP_260551046.1	NnrS family protein	-
ASALC70_RS15735 (ASALC70_03200)	2965059..2965771	+	713	Protein_3105	succinate dehydrogenase iron-sulfur subunit	-
ASALC70_RS15740 (ASALC70_03201)	2966051..2966500	+	450	WP_161384163.1	DUF2384 domain-containing protein	Antitoxin
ASALC70_RS15745 (ASALC70_03202)	2966497..2966961	+	465	WP_161384079.1	RES domain-containing protein	Toxin
ASALC70_RS15750	2967012..2967251	-	240	WP_260547746.1	hypothetical protein	-
ASALC70_RS15755 (ASALC70_03203)	2967649..2969340	+	1692	WP_194297308.1	sodium:solute symporter family protein	-
ASALC70_RS15760 (ASALC70_03204)	2969363..2969491	+	129	WP_228462291.1	putative transporter small subunit	-
ASALC70_RS15770 (ASALC70_03206)	2969738..2971642	-	1905	WP_161384081.1	RNA polymerase sigma factor RpoD	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• RES domain (7-146)

Antitoxin

• Antitoxin Xre (18-149)

Sequences

Toxin

Protein

• Length: 155 a.a.
• Molecular weight: 17093.40 Da
• Isoelectric Point: 4.5738

>T108302 WP_161384079.1 NZ_CP031009:2966497-2966961 [Alcanivorax sp. ALC70]
MSGIAAYRLVKRKWLDTVFDGEGARRFGGRWNSRGKSCVYLAGSESLALLEVMVHLDDYSLLQHYALLEVCLPEDQVLRL
PKSDLPGDWRDEPAPPSTAELGDGWLDGQSSLVLAVPSVVVPREWNYLLSPGHPEYEGLVAGAKEVNFEPDVRL

Nucleotide

• Length: 465 bp

>T108302 NZ_CP031009:2966497-2966961 [Alcanivorax sp. ALC70]
ATGAGTGGGATTGCCGCCTATCGGCTGGTTAAGCGTAAGTGGCTGGATACCGTCTTCGATGGCGAAGGCGCGCGGCGCTT
TGGCGGGCGGTGGAACAGCCGTGGTAAGTCTTGCGTGTATCTGGCGGGCTCTGAGTCCCTGGCGTTGCTGGAGGTGATGG
TCCATTTGGATGATTACAGCTTGCTGCAGCACTACGCGCTGCTGGAAGTATGCTTGCCGGAGGACCAGGTGCTGCGGTTA
CCGAAATCCGACCTGCCTGGCGATTGGCGTGACGAACCGGCGCCTCCGTCCACGGCCGAGTTGGGTGATGGTTGGTTGGA
TGGCCAGAGCAGCCTGGTGCTCGCGGTGCCGAGCGTGGTGGTGCCCCGTGAGTGGAATTACCTGCTTAGCCCGGGCCACC
CGGAGTATGAGGGCCTGGTTGCGGGCGCGAAGGAGGTGAATTTCGAGCCGGATGTTCGCCTGTAG

Antitoxin

Protein

• Length: 150 a.a.
• Molecular weight: 16605.03 Da
• Isoelectric Point: 9.3736

>AT108302 WP_161384163.1 NZ_CP031009:2966051-2966500 [Alcanivorax sp. ALC70]
MTVDPGEYRAPREAGSGFWKTVGIPARGARLHEALREGVSYVVYKQLVSVAGLEHQELARYLVIPPATLRRRAKAGKFKV
EESDRLYRFAEVLKAAIDLFEGDRERAVHWLSHPVRGLGDRRPVDMLATSAEAEAVLDLIGRLEHGAFA

Nucleotide

• Length: 450 bp

>AT108302 NZ_CP031009:2966051-2966500 [Alcanivorax sp. ALC70]
ATGACGGTTGATCCGGGCGAGTATCGAGCCCCCAGGGAAGCAGGCTCAGGTTTCTGGAAGACGGTCGGGATTCCCGCGCG
CGGCGCCCGGTTGCACGAGGCGCTGCGAGAGGGGGTGTCCTATGTTGTCTACAAGCAACTGGTGTCGGTGGCCGGTCTGG
AACACCAGGAGTTGGCCCGGTATCTGGTGATCCCGCCCGCCACGTTGCGACGACGGGCCAAGGCCGGGAAGTTTAAGGTG
GAGGAGAGTGACCGCCTGTATCGCTTCGCGGAGGTCCTTAAGGCGGCGATTGATCTGTTTGAAGGTGACCGTGAGCGGGC
CGTGCATTGGTTGTCGCACCCCGTACGGGGGCTGGGAGATCGACGTCCCGTGGATATGCTGGCCACATCCGCCGAAGCGG
AGGCCGTGCTGGACCTGATCGGCCGGCTTGAGCACGGCGCCTTCGCATGA