Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 2315616..2316130 Replicon chromosome
Accession NZ_CP029198
Organism Staphylococcus aureus strain aureus

Toxin (Protein)


Gene name TsdT Uniprot ID T1YA99
Locus tag FORC090_RS11905 Protein ID WP_000581792.1
Coordinates 2315616..2315825 (-) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID W8UW13
Locus tag FORC090_RS11910 Protein ID WP_000138932.1
Coordinates 2315837..2316130 (-) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FORC090_RS11885 2311124..2312482 - 1359 WP_000611464.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
FORC090_RS11890 2312497..2313567 - 1071 WP_042109557.1 D-alanine--D-alanine ligase -
FORC090_RS11895 2313885..2315087 + 1203 WP_001109939.1 rod shape-determining protein RodA -
FORC090_RS11900 2315351..2315488 - 138 WP_000828354.1 hypothetical protein -
FORC090_RS11905 2315616..2315825 - 210 WP_000581792.1 heavy-metal-associated domain-containing protein Toxin
FORC090_RS11910 2315837..2316130 - 294 WP_000138932.1 copper-sensing transcriptional repressor CsoR Antitoxin
FORC090_RS11915 2316296..2317779 + 1484 Protein_2249 cardiolipin synthase -
FORC090_RS11920 2317807..2318454 + 648 WP_001187630.1 HD domain-containing protein -
FORC090_RS11945 2319367..2320239 - 873 WP_000725802.1 membrane protein insertase YidC -
FORC090_RS11950 2320325..2320966 - 642 WP_000483153.1 thiamine phosphate synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7843.77 Da        Isoelectric Point: 4.1008

>T105208 WP_000581792.1 NZ_CP029198:c2315825-2315616 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVF

Download         Length: 210 bp

>T105208 NZ_CP029198:c2315825-2315616 [Staphylococcus aureus]
ATGATACATCAAAATACGATTTACACAGCGGGAATTGAAACAGAAGAACAAGTAAGTCAATTGACAGAACGCATTTCAAA
TATGATAGGTGTTCATCAAGTGAATATTAATATAATAGATGGTCAAGTAACTGTATCGTATGAGACACCAGCAAATTTGA
ATAGTATTGAAAAAGAAATCTATGATGAAGGATACAAAATTGTATTTTAG

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11197.82 Da        Isoelectric Point: 6.2243

>AT105208 WP_000138932.1 NZ_CP029198:c2316130-2315837 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp

>AT105208 NZ_CP029198:c2316130-2315837 [Staphylococcus aureus]
ATGACTGAACAAGATAATGCACATCATTCTGAACAAATAAAAACGAATCTTAAATCACGTTTAAATCGAATTGAAGGACA
AGTGAGAGCGATTAATCGCATGATTGAAGAAGATGTCTATTGTGATGATGTCCTTACGCAAATAAGAGCGACACGTTCGG
CGTTAAACAGTGTTGCGATAAAGTTATTAGAACAACATATGAAAAGTTGTATTATGAATAAAGTTAATCAAGGTGCTCAG
GAAGAGGCAATGGAAGAGTTATTAGTGACTTTTCAAAAATTGATTAAAGACTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6FF1

Antitoxin

Source ID Structure
AlphaFold DB W8UW13

References