101029

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mosAT/AbiEii-AbiEi
Location 4560501..4562217 Replicon chromosome
Accession NZ_CP028355
Organism Shewanella baltica strain CW2

Toxin (Protein)


Gene name mosT Uniprot ID -
Locus tag C8I07_RS19635 Protein ID WP_107404662.1
Coordinates 4560501..4561436 (-) Length 312 a.a.

Antitoxin (Protein)


Gene name mosA Uniprot ID -
Locus tag C8I07_RS19640 Protein ID WP_107404663.1
Coordinates 4561429..4562217 (-) Length 263 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C8I07_RS19610 4556765..4557331 - 567 WP_107404659.1 hypothetical protein -
C8I07_RS19620 4558692..4559273 - 582 WP_199850879.1 hypothetical protein -
C8I07_RS19625 4559677..4559934 + 258 WP_107404660.1 hypothetical protein -
C8I07_RS19630 4559971..4560381 + 411 WP_107404661.1 hypothetical protein -
C8I07_RS19635 4560501..4561436 - 936 WP_107404662.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
C8I07_RS19640 4561429..4562217 - 789 WP_107404663.1 type IV toxin-antitoxin system AbiEi family antitoxin Antitoxin
C8I07_RS19645 4562472..4562870 + 399 WP_107404664.1 hypothetical protein -
C8I07_RS19650 4563131..4564177 - 1047 WP_159049130.1 hypothetical protein -
C8I07_RS19655 4564437..4564868 - 432 WP_107404666.1 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD -
C8I07_RS19660 4564869..4566110 - 1242 WP_107404667.1 HipA domain-containing protein -
C8I07_RS19665 4566097..4566432 - 336 WP_106649799.1 helix-turn-helix domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Integrative and Conjugative Element - - 4559397..4583119 23722


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(13-266)

Antitoxin

Transcriptional regulator AbiEi antitoxin, N-terminal domain

(1-97)


Sequences

Toxin        


Download         Length: 312 a.a.        Molecular weight: 35345.19 Da        Isoelectric Point: 7.0666

>T101029 WP_107404662.1 NZ_CP028355:c4561436-4560501 [Shewanella baltica]
MNKSSIYYQQVTLLIRMLPLVAQEKVFALKGGTAINLFVRNFPRLSVDIDLAYLPLEPREQALQSVKEALGRLTAKINLQ
PNLSAVFQDNKYDELRVVVTSDRVTIKIEVSPVARGTLHKAVLMPVVELVEEEFGYAEIPVVSLPDLYGGKLCAAMDRQH
PRDLFDVKMLLAEEGISREILVGFLTYTLSHPRPINEVMSPRWKPLDESFQTEFNGMTTKPIKLDELILTRSEMLTALQH
HFTAKDRDFLLSFKQGQPDWSLFDEPSVAALPAVRWKLLNIQNLAKNKSKHQEQLIKLADVLETWVAGRIL

Download         Length: 936 bp

>T101029 NZ_CP028355:c4561436-4560501 [Shewanella baltica]
ATGAATAAGTCATCGATATACTACCAGCAAGTGACCTTGCTTATTCGGATGCTGCCGCTCGTCGCCCAAGAGAAGGTATT
TGCCCTAAAGGGCGGTACGGCTATCAACCTATTTGTACGCAACTTCCCACGCTTATCGGTTGATATCGATTTGGCTTATC
TTCCTTTGGAGCCAAGGGAACAAGCGCTACAAAGTGTGAAGGAAGCGCTTGGTCGTTTGACTGCGAAGATCAATCTACAA
CCGAACCTTAGTGCAGTATTTCAAGACAATAAATATGATGAGCTCAGGGTTGTCGTGACAAGTGATAGGGTGACAATAAA
AATTGAAGTCTCTCCTGTTGCGAGAGGTACGCTACACAAAGCGGTATTAATGCCAGTCGTTGAGTTAGTTGAAGAAGAAT
TTGGGTATGCAGAGATACCGGTTGTAAGCCTGCCTGATCTATACGGTGGTAAGTTATGTGCAGCGATGGATAGGCAGCAC
CCAAGGGATCTTTTCGATGTGAAAATGCTGCTGGCGGAAGAGGGGATCAGTCGAGAGATTTTAGTCGGCTTTCTCACTTA
TACACTTAGCCATCCAAGACCCATTAATGAAGTGATGTCTCCACGTTGGAAACCGCTTGATGAAAGCTTTCAAACTGAAT
TCAATGGAATGACGACAAAGCCGATTAAACTCGATGAGCTGATTTTAACTCGCTCAGAAATGCTCACAGCGTTGCAGCAT
CACTTTACTGCAAAAGATAGAGACTTTTTATTATCCTTTAAACAGGGTCAGCCTGATTGGTCATTGTTTGATGAACCGAG
CGTTGCGGCACTACCTGCGGTGAGATGGAAGCTATTGAATATCCAAAACCTAGCGAAAAATAAATCCAAGCATCAAGAAC
AACTGATTAAACTGGCTGATGTATTGGAGACGTGGGTTGCAGGTCGGATATTGTAA

Antitoxin


Download         Length: 263 a.a.        Molecular weight: 29869.94 Da        Isoelectric Point: 9.1357

>AT101029 WP_107404663.1 NZ_CP028355:c4562217-4561429 [Shewanella baltica]
MSSKINWLINHTSPGAVVLQSWLTQNEISSSLVRKYVQSGWLYKISAGVYVRPESTGKLQPHWVEALKAVNEQLKLPVHL
AGVSSLTHQGLSHYLQLSSEQVWVGCESKQALPKWFRELEEQNWLFYTSSKLTQTLEKDFITIGVNNREVKASCAELAAY
EVVNAIGKHISFEHAAELFQGLVNLSPRKIQSILNRSEAVQANRVFLFLGHYYQHQWSKRLDEQQITLGAGKRQVVAHGR
YDGRYQITVPASFIKTEENQYE

Download         Length: 789 bp

>AT101029 NZ_CP028355:c4562217-4561429 [Shewanella baltica]
ATGTCATCAAAAATAAACTGGCTTATTAATCATACGAGTCCTGGTGCGGTAGTGCTTCAGTCGTGGTTGACACAAAATGA
GATCAGCTCATCTTTGGTGAGAAAATATGTGCAGAGTGGTTGGTTGTACAAGATAAGTGCGGGGGTTTACGTTCGTCCTG
AGTCAACAGGTAAGTTACAGCCTCATTGGGTTGAAGCGCTCAAGGCTGTGAATGAGCAGCTAAAGCTTCCTGTTCACCTT
GCGGGAGTCAGTAGCCTAACGCATCAAGGGCTTAGTCATTATCTTCAACTAAGCAGCGAGCAAGTTTGGGTTGGCTGTGA
AAGTAAGCAGGCTTTACCAAAGTGGTTCCGCGAATTGGAGGAGCAAAATTGGCTTTTCTATACCAGTAGCAAGCTGACTC
AAACGTTGGAAAAAGACTTTATTACTATAGGGGTGAACAATAGGGAAGTTAAGGCAAGTTGTGCGGAGCTTGCAGCCTAT
GAGGTCGTCAATGCCATTGGCAAACATATCAGTTTTGAGCATGCCGCGGAGCTGTTTCAAGGGTTAGTGAATCTCAGCCC
ACGTAAAATACAGTCAATACTGAATCGAAGTGAAGCCGTACAAGCTAATCGCGTATTTCTCTTTTTAGGCCACTACTATC
AACACCAGTGGAGCAAAAGGCTAGATGAGCAGCAAATCACGCTAGGCGCGGGAAAGCGTCAGGTGGTGGCTCATGGCCGT
TACGATGGACGGTATCAAATAACAGTGCCTGCATCGTTTATTAAGACAGAAGAAAATCAATATGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References