Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1941156..1941793 Replicon chromosome
Accession NZ_CP028204
Organism Bacillus velezensis strain SRCM102755

Toxin (Protein)


Gene name mazF Uniprot ID G4NU33
Locus tag C7M18_RS09695 Protein ID WP_003156187.1
Coordinates 1941443..1941793 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID I2HMS5
Locus tag C7M18_RS09690 Protein ID WP_003156188.1
Coordinates 1941156..1941437 (+) Length 94 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C7M18_RS09670 1937521..1938120 - 600 WP_003156193.1 rhomboid family intramembrane serine protease -
C7M18_RS09675 1938213..1938578 + 366 WP_014304402.1 holo-ACP synthase -
C7M18_RS09680 1938743..1939750 + 1008 WP_007410230.1 outer membrane lipoprotein carrier protein LolA -
C7M18_RS09685 1939867..1941036 + 1170 WP_021495079.1 alanine racemase -
C7M18_RS09690 1941156..1941437 + 282 WP_003156188.1 type II toxin-antitoxin system antitoxin EndoAI Antitoxin
C7M18_RS09695 1941443..1941793 + 351 WP_003156187.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
C7M18_RS09700 1941911..1942732 + 822 WP_003156182.1 STAS domain-containing protein -
C7M18_RS09705 1942737..1943102 + 366 WP_003156180.1 RsbT antagonist protein RsbS -
C7M18_RS09710 1943105..1943506 + 402 WP_003156178.1 anti-sigma regulatory factor -
C7M18_RS09715 1943518..1944525 + 1008 WP_007609589.1 PP2C family protein-serine/threonine phosphatase -
C7M18_RS09720 1944589..1944918 + 330 WP_003156176.1 anti-sigma factor antagonist RsbV -
C7M18_RS09725 1944915..1945397 + 483 WP_007609591.1 anti-sigma B factor RsbW -
C7M18_RS09730 1945363..1946151 + 789 WP_003156171.1 RNA polymerase sigma factor SigB -
C7M18_RS09735 1946151..1946753 + 603 WP_007410234.1 SpoIIE family protein phosphatase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(4-111)

Antitoxin

(12-45)


Sequences


Toxin        


Download         Length: 117 a.a.        Molecular weight: 12977.98 Da        Isoelectric Point: 4.8781

>T100858 WP_003156187.1 NZ_CP028204:1941443-1941793 [Bacillus velezensis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF

Download         Length: 351 bp

>T100858 NZ_CP028204:1941443-1941793 [Bacillus velezensis]
TTGATTGTAAAGCGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGCGTACGCCCGGT
TTTAGTGATCCAAAATGATATCGGAAATCGCTTTAGCCCGACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGATTAACGGATAAAATAACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCCT
GCAAATCAGTTTGGCACTCATTGATTTTTAG

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10562.92 Da        Isoelectric Point: 6.4706

>AT100858 WP_003156188.1 NZ_CP028204:1941156-1941437 [Bacillus velezensis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG

Download         Length: 282 bp

>AT100858 NZ_CP028204:1941156-1941437 [Bacillus velezensis]
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAACTTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGGACAACTCGCCATAACC
GTGATTTGATGAGACGCGGGTATATGGAAATGGCGAAAATCAACTTGAATATCTCTTCTGAGGCTCACTATGCTGAGTGC
GAAGCAGAAACGACCGTTGAGCGCTTAGTCAGCGGAGGATAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 4MDX
PDB 4ME7
PDB 1NE8


Antitoxin

Source ID Structure
AlphaFold DB I2HMS5

References