MGE detailed information
MGE type: Conjugative plasmid MGE length: 100782 bp
Accession: NZ_OX030730 Location: 1..100782 Organism: Escherichia coli isolate 68 Replicon: plasmid P2
Accession: NZ_OX030730 Location: 1..100782 Organism: Escherichia coli isolate 68 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ200_RS25945 (AI2959V1_5001) | 1..1032 | + | 1032 | WP_000907880.1 | plasmid replication initiator RepA | - |
| LQ200_RS25950 (AI2959V1_5002) | 1940..2224 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LQ200_RS25955 (AI2959V1_5003) | 2224..2499 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ200_RS25960 (AI2959V1_5004) | 2605..2808 | + | 204 | Protein_3 | hypothetical protein | - |
| LQ200_RS25965 (AI2959V1_5005) | 3077..3343 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| LQ200_RS25970 (AI2959V1_5006) | 3581..4183 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| LQ200_RS25975 (AI2959V1_5007) | 4537..5883 | + | 1347 | WP_001132021.1 | protein YagA | - |
| LQ200_RS25980 (AI2959V1_5008) | 6426..6728 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| LQ200_RS25985 (AI2959V1_5009) | 6725..7351 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LQ200_RS25990 (AI2959V1_5010) | 7563..8834 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| LQ200_RS25995 (AI2959V1_5011) | 8834..9271 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ200_RS26000 (AI2959V1_5012) | 9268..9516 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| LQ200_RS26005 (AI2959V1_5013) | 9935..10837 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| LQ200_RS26010 | 10834..11145 | + | 312 | WP_031935767.1 | hypothetical protein | - |
| LQ200_RS26015 (AI2959V1_5014) | 11221..11904 | + | 684 | WP_000086137.1 | DNA methylase | - |
| LQ200_RS26020 (AI2959V1_5015) | 11905..12126 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| LQ200_RS26025 (AI2959V1_5016) | 12056..12574 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| LQ200_RS26030 (AI2959V1_5017) | 12619..13389 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| LQ200_RS26035 (AI2959V1_5018) | 13800..14225 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| LQ200_RS26040 (AI2959V1_5019) | 14272..14694 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| LQ200_RS26045 (AI2959V1_5020) | 14691..14882 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| LQ200_RS26050 (AI2959V1_5021) | 15161..16828 | - | 1668 | WP_001091723.1 | group II intron reverse transcriptase/maturase | - |
| LQ200_RS26055 (AI2959V1_5023) | 17997..18524 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| LQ200_RS26060 (AI2959V1_5024) | 18582..18815 | + | 234 | WP_000005972.1 | DUF905 domain-containing protein | - |
| LQ200_RS26065 (AI2959V1_5025) | 18874..20832 | + | 1959 | WP_021530058.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ200_RS26070 (AI2959V1_5026) | 20887..21321 | + | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| LQ200_RS26075 (AI2959V1_5027) | 21318..22037 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| LQ200_RS26080 (AI2959V1_5028) | 22034..22630 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| LQ200_RS26085 (AI2959V1_5029) | 23092..23592 | + | 501 | WP_000117630.1 | antirestriction protein ArdA | - |
| LQ200_RS26090 (AI2959V1_5030) | 24324..24758 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| LQ200_RS26095 (AI2959V1_5031) | 24851..25117 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| LQ200_RS26100 (AI2959V1_5032) | 25294..25683 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| LQ200_RS26105 (AI2959V1_5033) | 25680..26558 | + | 879 | WP_000038338.1 | Recombination-promoting nuclease RpnA | VF |
| LQ200_RS26110 (AI2959V1_5034) | 26617..26823 | + | 207 | WP_000150319.1 | hypothetical protein | VF |
| LQ200_RS26115 (AI2959V1_5035) | 26854..27105 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| LQ200_RS26120 (AI2959V1_5036) | 27683..28531 | + | 849 | WP_021530056.1 | DUF4942 domain-containing protein | - |
| LQ200_RS26125 (AI2959V1_5037) | 28617..28952 | - | 336 | WP_181261149.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LQ200_RS26130 (AI2959V1_5038) | 29185..29517 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| LQ200_RS26135 (AI2959V1_5039) | 29529..32240 | + | 2712 | WP_000991387.1 | Protein TraI | Relaxase |
| LQ200_RS26140 (AI2959V1_5040) | 32308..32739 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| LQ200_RS26145 (AI2959V1_5041) | 33089..33493 | + | 405 | Protein_40 | IS91 family transposase ISPps1 | Transposase |
| LQ200_RS26150 (AI2959V1_5042) | 33600..34331 | - | 732 | Protein_41 | hypothetical protein | ARG |
| LQ200_RS26155 (AI2959V1_5043) | 34366..37371 | - | 3006 | WP_230139595.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LQ200_RS26160 (AI2959V1_5044) | 37535..38092 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LQ200_RS26165 (AI2959V1_5045) | 38275..39135 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LQ200_RS26170 | 39284..39391 | - | 108 | Protein_45 | aminoglycoside phosphotransferase family protein | - |
| LQ200_RS26175 (AI2959V1_5046) | 39391..40194 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LQ200_RS26180 (AI2959V1_5047) | 40255..41070 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LQ200_RS26185 (AI2959V1_5049) | 41934..44237 | - | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| LQ200_RS26190 (AI2959V1_5050) | 44218..45342 | - | 1125 | WP_000152378.1 | DsbC family protein | - |
| LQ200_RS26195 (AI2959V1_5051) | 45339..46637 | - | 1299 | WP_000121917.1 | IncI1-type conjugal transfer protein TrbA | - |
| LQ200_RS26200 | 46975..47121 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| LQ200_RS26205 | 47702..47953 | + | 252 | WP_001081066.1 | DinQ-like type I toxin DqlB | - |
| LQ200_RS26210 (AI2959V1_5053) | 48016..48192 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| LQ200_RS26215 (AI2959V1_5054) | 48342..48809 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| LQ200_RS26220 (AI2959V1_5055) | 48969..49592 | + | 624 | WP_001155250.1 | helix-turn-helix domain-containing protein | - |
| LQ200_RS26225 (AI2959V1_5057) | 49790..50005 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| LQ200_RS26230 (AI2959V1_5058) | 50009..50377 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| LQ200_RS26235 | 50389..50580 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| LQ200_RS26240 (AI2959V1_5059) | 50668..50910 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| LQ200_RS26245 (AI2959V1_5060) | 51240..51392 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| LQ200_RS26250 (AI2959V1_5061) | 51530..53116 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LQ200_RS26255 (AI2959V1_5062) | 53390..54043 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LQ200_RS26260 (AI2959V1_5063) | 54131..56296 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| LQ200_RS26265 (AI2959V1_5064) | 56371..56940 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| LQ200_RS26270 (AI2959V1_5065) | 56937..58142 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| LQ200_RS26275 (AI2959V1_5066) | 58100..58720 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| LQ200_RS26280 (AI2959V1_5067) | 58720..61764 | - | 3045 | WP_013307872.1 | conjugal transfer nucleotide-binding protein | - |
| LQ200_RS26285 (AI2959V1_5068) | 62059..62877 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| LQ200_RS26290 | 62891..63043 | - | 153 | Protein_69 | TraS | - |
| LQ200_RS26295 (AI2959V1_5070) | 63100..63498 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| LQ200_RS26300 (AI2959V1_5071) | 63545..64075 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| LQ200_RS26305 (AI2959V1_5072) | 64072..64785 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| LQ200_RS26310 (AI2959V1_5073) | 64782..66119 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| LQ200_RS26315 (AI2959V1_5074) | 66123..67097 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| LQ200_RS26320 (AI2959V1_5075) | 67108..67803 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| LQ200_RS26325 (AI2959V1_5076) | 67815..68165 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| LQ200_RS26330 (AI2959V1_5077) | 68182..72243 | - | 4062 | WP_013307874.1 | DUF5710 domain-containing protein | - |
| LQ200_RS26335 (AI2959V1_5078) | 72597..73178 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| LQ200_RS26340 | 73186..73641 | - | 456 | Protein_79 | IS5 family transposase IS903B | Transposase |
| LQ200_RS26345 (AI2959V1_5079) | 73676..74551 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| LQ200_RS26350 (AI2959V1_5081) | 74801..76063 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| LQ200_RS26355 (AI2959V1_5082) | 76475..76765 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| LQ200_RS26360 (AI2959V1_5083) | 76762..77910 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| LQ200_RS26365 (AI2959V1_5084) | 77894..78730 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| LQ200_RS26370 (AI2959V1_5085) | 78727..79185 | - | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| LQ200_RS26375 (AI2959V1_5086) | 79289..80491 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| LQ200_RS26380 (AI2959V1_5087) | 80593..81414 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| LQ200_RS26385 (AI2959V1_5088) | 81627..82751 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| LQ200_RS26390 | 82806..83045 | + | 240 | WP_224671100.1 | pilus assembly protein PilV | - |
| LQ200_RS26395 | 83350..83610 | + | 261 | WP_230139596.1 | pilus assembly protein | - |
| LQ200_RS26400 | 83798..84076 | + | 279 | WP_049297685.1 | hypothetical protein | - |
| LQ200_RS26405 (AI2959V1_5091) | 84248..85609 | - | 1362 | WP_021532399.1 | hypothetical protein | VF |
| LQ200_RS26410 (AI2959V1_5092) | 85627..86253 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| LQ200_RS26415 (AI2959V1_5093) | 86269..86754 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| LQ200_RS26420 (AI2959V1_5094) | 86799..87335 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| LQ200_RS26425 (AI2959V1_5095) | 87397..88491 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LQ200_RS26430 (AI2959V1_5096) | 88493..90001 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| LQ200_RS26435 (AI2959V1_5097) | 90104..90562 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| LQ200_RS26440 (AI2959V1_5098) | 90552..91847 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| LQ200_RS26445 (AI2959V1_5099) | 91868..93487 | - | 1620 | WP_001035565.1 | Outer membrane lipoprotein BfpB | VF |
| LQ200_RS26450 (AI2959V1_5100) | 93519..93956 | - | 438 | WP_000539951.1 | hypothetical protein | VF |
| LQ200_RS26455 (AI2959V1_5101) | 93960..95030 | - | 1071 | WP_001441857.1 | hypothetical protein | VF |
| LQ200_RS26460 (AI2959V1_5102) | 95271..95591 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| LQ200_RS26465 (AI2959V1_5103) | 95707..95949 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| LQ200_RS26470 (AI2959V1_5104) | 96030..97724 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| LQ200_RS26475 (AI2959V1_5105) | 97751..98371 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| LQ200_RS26480 (AI2959V1_5106) | 98638..99300 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| LQ200_RS26485 (AI2959V1_5107) | 99441..99947 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|