MGE detailed information
MGE type: Prophage MGE length: 67950 bp
Accession: NZ_OW968288 Location: 2278072..2346021 Organism: Escherichia coli isolate 10 Replicon: chromosome
Accession: NZ_OW968288 Location: 2278072..2346021 Organism: Escherichia coli isolate 10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ134_RS10885 (2273323) | 2273323..2274033 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| LQ134_RS10890 (2274036) | 2274036..2274596 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LQ134_RS10895 (2274631) | 2274631..2274972 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| LQ134_RS10900 (2275107) | 2275107..2275433 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| LQ134_RS10905 (2275639) | 2275639..2276853 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| LQ134_RS10910 (2276865) | 2276865..2277884 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| LQ134_RS10915 (2278072) | 2278072..2279352 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LQ134_RS10920 (2279387) | 2279387..2279638 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| LQ134_RS10925 (2279711) | 2279711..2282182 | - | 2472 | WP_025693413.1 | exonuclease | - |
| LQ134_RS10930 (2282275) | 2282275..2282466 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| LQ134_RS10935 (2282463) | 2282463..2282651 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| LQ134_RS10940 (2283219) | 2283219..2283437 | - | 219 | WP_001171942.1 | protein YdfC | - |
| LQ134_RS25690 (2283467) | 2283467..2283595 | - | 129 | WP_000344964.1 | protein YdfB | - |
| LQ134_RS10945 (2283597) | 2283597..2283752 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| LQ134_RS10950 (2283919) | 2283919..2284326 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| LQ134_RS10955 (2284410) | 2284410..2284640 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| LQ134_RS10960 (2284624) | 2284624..2285145 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| LQ134_RS10965 (2285126) | 2285126..2286091 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| LQ134_RS10970 (2286132) | 2286132..2286554 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| LQ134_RS10975 (2286551) | 2286551..2287040 | + | 490 | Protein_2154 | class I SAM-dependent methyltransferase | - |
| LQ134_RS10980 (2287423) | 2287423..2288962 | - | 1540 | Protein_2155 | IS66 family transposase ISEc22 | Transposase |
| LQ134_RS10985 (2289011) | 2289011..2289358 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| LQ134_RS10990 (2289355) | 2289355..2289759 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| LQ134_RS10995 (2289981) | 2289981..2290402 | + | 422 | Protein_2158 | hypothetical protein | - |
| LQ134_RS11000 (2291058) | 2291058..2292080 | + | 1023 | Protein_2159 | ISNCY family transposase ISCARN112 | Transposase |
| LQ134_RS11005 (2292201) | 2292201..2292350 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| LQ134_RS11010 (2292790) | 2292790..2293998 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| LQ134_RS11015 (2294110) | 2294110..2294442 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| LQ134_RS11020 (2294645) | 2294645..2294950 | - | 306 | WP_001326990.1 | protein YdfV | - |
| LQ134_RS11025 (2294975) | 2294975..2295214 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LQ134_RS11030 (2295214) | 2295214..2295501 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LQ134_RS11035 (2295573) | 2295573..2295728 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LQ134_RS11040 (2295945) | 2295945..2296196 | + | 252 | WP_000980994.1 | protein Rem | - |
| LQ134_RS11045 (2296263) | 2296263..2296541 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| LQ134_RS11050 (2296543) | 2296543..2297592 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| LQ134_RS11055 (2297606) | 2297606..2298358 | + | 753 | WP_001047135.1 | antitermination protein | - |
| LQ134_RS11060 (2298636) | 2298636..2298725 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| LQ134_RS11065 (2298780) | 2298780..2298992 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| LQ134_RS11070 (2299293) | 2299293..2299508 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| LQ134_RS11075 (2299872) | 2299872..2300042 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| LQ134_RS11080 (2300187) | 2300187..2301400 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| LQ134_RS11085 (2301575) | 2301575..2301784 | + | 210 | WP_032347816.1 | phage lysis protein EssD | - |
| LQ134_RS11090 (2301795) | 2301795..2301872 | + | 78 | Protein_2177 | DUF1327 domain-containing protein | - |
| LQ134_RS11095 (2301930) | 2301930..2302898 | - | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| LQ134_RS11100 (2302918) | 2302918..2303172 | + | 255 | WP_097727610.1 | DUF1327 domain-containing protein | - |
| LQ134_RS11105 (2303169) | 2303169..2303702 | + | 534 | WP_001092971.1 | lysozyme | - |
| LQ134_RS11110 (2303699) | 2303699..2304196 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| LQ134_RS11115 (2304559) | 2304559..2304771 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| LQ134_RS11120 (2304782) | 2304782..2304970 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| LQ134_RS11125 (2304973) | 2304973..2305038 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| LQ134_RS11130 (2305043) | 2305043..2305273 | + | 231 | WP_000720962.1 | protein YnfN | - |
| LQ134_RS11135 (2305445) | 2305445..2305618 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| LQ134_RS11140 (2305770) | 2305770..2306180 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| LQ134_RS11145 (2306238) | 2306238..2306471 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| LQ134_RS11150 (2306860) | 2306860..2307405 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| LQ134_RS11155 (2307380) | 2307380..2309305 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| LQ134_RS11160 (2309302) | 2309302..2309508 | + | 207 | WP_000198149.1 | gpW family protein | - |
| LQ134_RS11165 (2309505) | 2309505..2311106 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| LQ134_RS11170 (2311087) | 2311087..2312406 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| LQ134_RS11175 (2312416) | 2312416..2312748 | + | 333 | WP_001295978.1 | head decoration protein | - |
| LQ134_RS11180 (2312805) | 2312805..2313050 | + | 246 | Protein_2195 | major capsid protein | - |
| LQ134_RS11185 (2313213) | 2313213..2314448 | + | 1236 | WP_000896722.1 | hypothetical protein ; Integrase | Integrase |
| LQ134_RS11190 (2314450) | 2314450..2314680 | + | 231 | WP_000737990.1 | AlpA family phage regulatory protein | - |
| LQ134_RS11195 (2314697) | 2314697..2315518 | + | 822 | WP_025693428.1 | DUF2971 domain-containing protein | - |
| LQ134_RS11200 (2315768) | 2315768..2316976 | + | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| LQ134_RS11205 (2317358) | 2317358..2317624 | + | 267 | Protein_2200 | hypothetical protein | - |
| LQ134_RS11210 (2317688) | 2317688..2317891 | + | 204 | WP_016247985.1 | host cell division inhibitor Icd-like protein | - |
| LQ134_RS11215 (2317884) | 2317884..2318069 | + | 186 | WP_000920681.1 | hypothetical protein | - |
| LQ134_RS11220 (2318069) | 2318069..2318260 | + | 192 | WP_001156310.1 | hypothetical protein | - |
| LQ134_RS11225 (2318261) | 2318261..2318482 | + | 222 | WP_016247986.1 | hypothetical protein | - |
| LQ134_RS11230 (2318500) | 2318500..2318799 | + | 300 | WP_000425298.1 | DUF4222 domain-containing protein | - |
| LQ134_RS11235 (2318796) | 2318796..2320547 | + | 1752 | WP_001710058.1 | DUF5906 domain-containing protein | - |
| LQ134_RS11240 (2320837) | 2320837..2321094 | + | 258 | WP_001356810.1 | hypothetical protein | - |
| LQ134_RS11245 (2321091) | 2321091..2321540 | + | 450 | WP_001710062.1 | single-stranded DNA-binding protein | - |
| LQ134_RS11250 (2321757) | 2321757..2322797 | + | 1041 | WP_025693427.1 | major capsid protein | - |
| LQ134_RS11255 (2322807) | 2322807..2323148 | + | 342 | WP_000190772.1 | head decoration protein | - |
| LQ134_RS11260 (2323160) | 2323160..2323543 | + | 384 | WP_001178671.1 | AlpA family phage regulatory protein | - |
| LQ134_RS11265 (2324027) | 2324027..2325343 | - | 1317 | WP_016247987.1 | hypothetical protein | - |
| LQ134_RS11270 (2325699) | 2325699..2326487 | + | 789 | Protein_2213 | major capsid protein | - |
| LQ134_RS11275 (2326529) | 2326529..2326927 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| LQ134_RS11280 (2326939) | 2326939..2327292 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| LQ134_RS11285 (2327304) | 2327304..2327882 | + | 579 | WP_000975070.1 | phage tail protein | - |
| LQ134_RS11290 (2327879) | 2327879..2328274 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| LQ134_RS11295 (2328282) | 2328282..2329022 | + | 741 | WP_001349920.1 | phage tail protein | - |
| LQ134_RS11300 (2329038) | 2329038..2329460 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| LQ134_RS11305 (2329442) | 2329442..2329876 | + | 435 | WP_025693426.1 | phage tail assembly protein T | - |
| LQ134_RS11310 (2329869) | 2329869..2332430 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| LQ134_RS11315 (2332427) | 2332427..2332756 | + | 330 | WP_000847379.1 | phage tail protein | - |
| LQ134_RS11320 (2332756) | 2332756..2333454 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| LQ134_RS11325 (2333460) | 2333460..2334203 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| LQ134_RS11330 (2334200) | 2334200..2334772 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| LQ134_RS11335 (2334833) | 2334833..2338330 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| LQ134_RS11340 (2338400) | 2338400..2338999 | + | 600 | WP_001230375.1 | Attachment invasion locus protein | VF |
| LQ134_RS11345 (2339064) | 2339064..2342138 | + | 3075 | WP_000279080.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LQ134_RS11350 (2342138) | 2342138..2342713 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| LQ134_RS11355 (2342811) | 2342811..2343401 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LQ134_RS11360 (2343718) | 2343718..2343951 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| LQ134_RS11365 (2344020) | 2344020..2344133 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| LQ134_RS11370 (2344654) | 2344654..2346021 | + | 1368 | Protein_2233 | MHS family MFS transporter | - |
| LQ134_RS11375 (2346110) | 2346110..2347570 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| LQ134_RS11380 (2347605) | 2347605..2347808 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LQ134_RS11385 (2347985) | 2347985..2348671 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| LQ134_RS11390 (2348760) | 2348760..2349506 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|