MGE detailed information
MGE type: Prophage MGE length: 67965 bp
Accession: NZ_OW968124 Location: 2277675..2345639 Organism: Escherichia coli isolate 10 Replicon: chromosome
Accession: NZ_OW968124 Location: 2277675..2345639 Organism: Escherichia coli isolate 10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ159_RS10895 (2272926) | 2272926..2273636 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| LQ159_RS10900 (2273639) | 2273639..2274199 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LQ159_RS10905 (2274234) | 2274234..2274575 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| LQ159_RS10910 (2274710) | 2274710..2275036 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| LQ159_RS10915 (2275242) | 2275242..2276456 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| LQ159_RS10920 (2276468) | 2276468..2277487 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| LQ159_RS10925 (2277675) | 2277675..2278955 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LQ159_RS10930 (2278990) | 2278990..2279241 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| LQ159_RS10935 (2279314) | 2279314..2281785 | - | 2472 | WP_025693413.1 | exonuclease | - |
| LQ159_RS10940 (2281878) | 2281878..2282069 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| LQ159_RS10945 (2282066) | 2282066..2282254 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| LQ159_RS10950 (2282822) | 2282822..2283040 | - | 219 | WP_001171942.1 | protein YdfC | - |
| LQ159_RS25595 (2283070) | 2283070..2283198 | - | 129 | WP_000344964.1 | protein YdfB | - |
| LQ159_RS10955 (2283200) | 2283200..2283355 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| LQ159_RS10960 (2283522) | 2283522..2283929 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| LQ159_RS10965 (2284013) | 2284013..2284243 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| LQ159_RS10970 (2284227) | 2284227..2284748 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| LQ159_RS10975 (2284729) | 2284729..2285694 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| LQ159_RS10980 (2285735) | 2285735..2286157 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| LQ159_RS10985 (2286154) | 2286154..2286643 | + | 490 | Protein_2155 | class I SAM-dependent methyltransferase | - |
| LQ159_RS10990 (2287026) | 2287026..2288565 | - | 1540 | Protein_2156 | IS66 family transposase ISEc22 | Transposase |
| LQ159_RS10995 (2288614) | 2288614..2288961 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| LQ159_RS11000 (2288958) | 2288958..2289362 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| LQ159_RS11005 (2289584) | 2289584..2290005 | + | 422 | Protein_2159 | hypothetical protein | - |
| LQ159_RS11010 (2290661) | 2290661..2291683 | + | 1023 | Protein_2160 | ISNCY family transposase ISCARN112 | Transposase |
| LQ159_RS11015 (2291804) | 2291804..2291953 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| LQ159_RS11020 (2292390) | 2292390..2292722 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| LQ159_RS11025 (2292925) | 2292925..2293230 | - | 306 | WP_001326990.1 | protein YdfV | - |
| LQ159_RS11030 (2293255) | 2293255..2293494 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LQ159_RS11035 (2293494) | 2293494..2293781 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LQ159_RS11040 (2293853) | 2293853..2294008 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LQ159_RS11045 (2294225) | 2294225..2294476 | + | 252 | WP_000980994.1 | protein Rem | - |
| LQ159_RS11050 (2294543) | 2294543..2294821 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| LQ159_RS11055 (2294823) | 2294823..2295872 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| LQ159_RS11060 (2295886) | 2295886..2296638 | + | 753 | WP_001047135.1 | antitermination protein | - |
| LQ159_RS11065 (2296916) | 2296916..2297005 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| LQ159_RS11070 (2297060) | 2297060..2297272 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| LQ159_RS11075 (2297573) | 2297573..2297743 | + | 171 | WP_230163677.1 | cold shock domain-containing protein | - |
| LQ159_RS11085 (2299465) | 2299465..2299635 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| LQ159_RS11090 (2299855) | 2299855..2300064 | + | 210 | WP_032347816.1 | phage lysis protein EssD | - |
| LQ159_RS11095 (2300075) | 2300075..2300152 | + | 78 | Protein_2177 | DUF1327 domain-containing protein | - |
| LQ159_RS11100 (2300210) | 2300210..2301178 | - | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| LQ159_RS11105 (2301198) | 2301198..2301452 | + | 255 | WP_097727610.1 | DUF1327 domain-containing protein | - |
| LQ159_RS11110 (2301449) | 2301449..2301982 | + | 534 | WP_001092971.1 | lysozyme | - |
| LQ159_RS11115 (2301979) | 2301979..2302476 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| LQ159_RS11120 (2302839) | 2302839..2303051 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| LQ159_RS11125 (2303062) | 2303062..2303250 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| LQ159_RS11130 (2303253) | 2303253..2303318 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| LQ159_RS11135 (2303323) | 2303323..2303553 | + | 231 | WP_000720962.1 | protein YnfN | - |
| LQ159_RS11140 (2303725) | 2303725..2303898 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| LQ159_RS11145 (2304050) | 2304050..2304460 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| LQ159_RS11150 (2304518) | 2304518..2304751 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| LQ159_RS11155 (2305140) | 2305140..2305685 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| LQ159_RS11160 (2305660) | 2305660..2307585 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| LQ159_RS11165 (2307582) | 2307582..2307788 | + | 207 | WP_000198149.1 | gpW family protein | - |
| LQ159_RS11170 (2307785) | 2307785..2309386 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| LQ159_RS11175 (2309367) | 2309367..2310686 | + | 1320 | WP_032330058.1 | S49 family peptidase | - |
| LQ159_RS11180 (2310696) | 2310696..2311028 | + | 333 | WP_001295978.1 | head decoration protein | - |
| LQ159_RS11185 (2311085) | 2311085..2311330 | + | 246 | Protein_2195 | major capsid protein | - |
| LQ159_RS11190 (2311493) | 2311493..2312728 | + | 1236 | WP_000896722.1 | hypothetical protein ; Integrase | Integrase |
| LQ159_RS11195 (2312730) | 2312730..2312960 | + | 231 | WP_000737990.1 | AlpA family phage regulatory protein | - |
| LQ159_RS11200 (2312977) | 2312977..2313798 | + | 822 | WP_025693428.1 | DUF2971 domain-containing protein | - |
| LQ159_RS11205 (2314048) | 2314048..2315256 | + | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| LQ159_RS11210 (2315638) | 2315638..2315904 | + | 267 | Protein_2200 | hypothetical protein | - |
| LQ159_RS11215 (2315968) | 2315968..2316171 | + | 204 | WP_016247985.1 | host cell division inhibitor Icd-like protein | - |
| LQ159_RS11220 (2316164) | 2316164..2316349 | + | 186 | WP_000920681.1 | hypothetical protein | - |
| LQ159_RS11225 (2316349) | 2316349..2316540 | + | 192 | WP_001156310.1 | hypothetical protein | - |
| LQ159_RS11230 (2316541) | 2316541..2316762 | + | 222 | WP_016247986.1 | hypothetical protein | - |
| LQ159_RS11235 (2316780) | 2316780..2317079 | + | 300 | WP_000425298.1 | DUF4222 domain-containing protein | - |
| LQ159_RS11240 (2317076) | 2317076..2318827 | + | 1752 | WP_001710058.1 | DUF5906 domain-containing protein | - |
| LQ159_RS11245 (2319117) | 2319117..2319374 | + | 258 | WP_001356810.1 | hypothetical protein | - |
| LQ159_RS11250 (2319371) | 2319371..2319820 | + | 450 | WP_001710062.1 | single-stranded DNA-binding protein | - |
| LQ159_RS11255 (2320037) | 2320037..2321077 | + | 1041 | WP_025693427.1 | major capsid protein | - |
| LQ159_RS11260 (2321087) | 2321087..2321428 | + | 342 | WP_000190772.1 | head decoration protein | - |
| LQ159_RS11265 (2321440) | 2321440..2321823 | + | 384 | WP_001178671.1 | AlpA family phage regulatory protein | - |
| LQ159_RS11270 (2322307) | 2322307..2323623 | - | 1317 | WP_016247987.1 | hypothetical protein | - |
| LQ159_RS11275 (2323979) | 2323979..2324767 | + | 789 | Protein_2213 | major capsid protein | - |
| LQ159_RS11280 (2324809) | 2324809..2325207 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| LQ159_RS11285 (2325219) | 2325219..2325572 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| LQ159_RS11290 (2325584) | 2325584..2326162 | + | 579 | WP_000975070.1 | phage tail protein | - |
| LQ159_RS11295 (2326159) | 2326159..2326554 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| LQ159_RS11300 (2326562) | 2326562..2327302 | + | 741 | WP_001349920.1 | phage tail protein | - |
| LQ159_RS11305 (2327318) | 2327318..2327740 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| LQ159_RS11310 (2327722) | 2327722..2328156 | + | 435 | WP_025693426.1 | phage tail assembly protein T | - |
| LQ159_RS11315 (2328149) | 2328149..2330710 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| LQ159_RS11320 (2330707) | 2330707..2331036 | + | 330 | WP_000847379.1 | phage tail protein | - |
| LQ159_RS11325 (2331036) | 2331036..2331734 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| LQ159_RS11330 (2331740) | 2331740..2332483 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| LQ159_RS11335 (2332480) | 2332480..2333052 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| LQ159_RS11340 (2333202) | 2333202..2334410 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| LQ159_RS11345 (2334517) | 2334517..2337948 | + | 3432 | Protein_2227 | host specificity protein J | - |
| LQ159_RS11350 (2338018) | 2338018..2338617 | + | 600 | WP_001230375.1 | Attachment invasion locus protein | VF |
| LQ159_RS11355 (2338682) | 2338682..2341756 | + | 3075 | WP_000279080.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LQ159_RS11360 (2341756) | 2341756..2342331 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| LQ159_RS11365 (2342429) | 2342429..2343019 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LQ159_RS11370 (2343336) | 2343336..2343569 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| LQ159_RS11375 (2343638) | 2343638..2343751 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| LQ159_RS11380 (2344272) | 2344272..2345639 | + | 1368 | Protein_2234 | MHS family MFS transporter | - |
| LQ159_RS11385 (2345728) | 2345728..2347188 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| LQ159_RS11390 (2347223) | 2347223..2347426 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LQ159_RS11395 (2347603) | 2347603..2348289 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| LQ159_RS11400 (2348378) | 2348378..2349124 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|