MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92189 bp
Accession: NZ_OW848789 Location: 1..92189 Organism: Citrobacter freundii isolate 112 Replicon: plasmid P1
Accession: NZ_OW848789 Location: 1..92189 Organism: Citrobacter freundii isolate 112 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ087_RS24620 (AI2602V1_4787) | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| LQ087_RS24625 (AI2602V1_4788) | 1823..2146 | - | 324 | Protein_1 | lipocalin family protein | - |
| LQ087_RS24630 (AI2602V1_4789) | 2264..2989 | + | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| LQ087_RS24635 (AI2602V1_4790) | 3089..3499 | + | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| LQ087_RS24640 (AI2602V1_4791) | 3602..4561 | + | 960 | WP_000208727.1 | DUF523 and DUF1722 domain-containing protein | - |
| LQ087_RS24645 (AI2602V1_4792) | 4707..5795 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| LQ087_RS24650 (AI2602V1_4793) | 5858..6562 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| LQ087_RS24655 (AI2602V1_4794) | 6826..7899 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| LQ087_RS24660 (AI2602V1_4795) | 7943..8092 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| LQ087_RS24665 | 8299..8409 | - | 111 | Protein_9 | protein YdfV | - |
| LQ087_RS24670 (AI2602V1_4796) | 8434..8673 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LQ087_RS24675 (AI2602V1_4797) | 8673..8960 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LQ087_RS24680 (AI2602V1_4798) | 9264..10046 | - | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| LQ087_RS24685 (AI2602V1_4799) | 10043..11065 | - | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| LQ087_RS24690 | 11204..11428 | + | 225 | Protein_14 | hypothetical protein | - |
| LQ087_RS24695 (AI2602V1_4800) | 11865..14072 | + | 2208 | WP_230122453.1 | AAA family ATPase | - |
| LQ087_RS24700 (AI2602V1_4801) | 14075..16657 | + | 2583 | WP_000449742.1 | nuclease domain-containing protein | - |
| LQ087_RS24710 | 17836..18195 | + | 360 | WP_170877903.1 | hypothetical protein | - |
| LQ087_RS24715 (AI2602V1_4804) | 18243..19220 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| LQ087_RS24720 | 19412..19769 | + | 358 | Protein_20 | IS1 family transposase | - |
| LQ087_RS24725 (AI2602V1_4805) | 20310..22061 | - | 1752 | Protein_21 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ087_RS24730 | 22065..22457 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LQ087_RS24735 (AI2602V1_4806) | 22595..23479 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LQ087_RS24740 (AI2602V1_4807) | 23511..24710 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| LQ087_RS24745 (AI2602V1_4808) | 24816..25466 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LQ087_RS24750 (AI2602V1_4809) | 25498..25740 | - | 243 | WP_000844627.1 | transposase | - |
| LQ087_RS24755 (AI2602V1_4810) | 25798..26568 | - | 771 | Protein_27 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ087_RS24760 (AI2602V1_4811) | 26675..27511 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LQ087_RS24765 | 27511..28314 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LQ087_RS24770 (AI2602V1_4813) | 28279..28896 | + | 618 | WP_051120014.1 | hypothetical protein | - |
| LQ087_RS24775 (AI2602V1_4814) | 29137..29778 | - | 642 | WP_073984367.1 | MBL fold metallo-hydrolase | - |
| LQ087_RS24780 (AI2602V1_4816) | 30018..31268 | - | 1251 | WP_040178261.1 | IS1380 family transposase ISEcp1 | Transposase |
| LQ087_RS24785 (AI2602V1_4817) | 31293..31997 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LQ087_RS24790 (AI2602V1_4818) | 32051..34360 | + | 2310 | Protein_34 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LQ087_RS24795 (AI2602V1_4819) | 34393..36594 | - | 2202 | Protein_35 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ087_RS24800 (AI2602V1_4820) | 36598..37158 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LQ087_RS24805 | 37334..37684 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| LQ087_RS24810 (AI2602V1_4822) | 37887..38900 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LQ087_RS24815 (AI2602V1_4823) | 39192..39746 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LQ087_RS24820 (AI2602V1_4824) | 39877..40707 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LQ087_RS24825 (AI2602V1_4825) | 40845..41477 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| LQ087_RS24830 (AI2602V1_4826) | 41562..42014 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LQ087_RS24835 (AI2602V1_4827) | 42237..42584 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LQ087_RS24840 (AI2602V1_4828) | 42578..43417 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LQ087_RS24845 (AI2602V1_4829) | 43545..43748 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| LQ087_RS24850 (AI2602V1_4830) | 43904..45109 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| LQ087_RS24855 (AI2602V1_4831) | 45120..45425 | + | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| LQ087_RS24860 | 45469..45534 | + | 66 | Protein_48 | EAL domain-containing protein | - |
| LQ087_RS24865 (AI2602V1_4832) | 45652..46416 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LQ087_RS24870 (AI2602V1_4833) | 46909..47493 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LQ087_RS24875 (AI2602V1_4834) | 47493..48731 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LQ087_RS24880 (AI2602V1_4835) | 48728..49633 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LQ087_RS24885 (AI2602V1_4836) | 49755..50459 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ087_RS24890 (AI2602V1_4837) | 50610..51425 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LQ087_RS24895 (AI2602V1_4838) | 51615..52319 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ087_RS24900 (AI2602V1_4839) | 52384..53211 | + | 828 | Protein_56 | IS110 family transposase IS5075 | Transposase |
| LQ087_RS24905 | 53483..53569 | - | 87 | Protein_57 | Arm DNA-binding domain-containing protein | - |
| LQ087_RS24910 (AI2602V1_4841) | 53899..54714 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LQ087_RS24915 (AI2602V1_4842) | 54801..55043 | + | 243 | Protein_59 | phosphoglucosamine mutase | - |
| LQ087_RS24920 (AI2602V1_4843) | 55279..56772 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| LQ087_RS24925 (AI2602V1_4844) | 56983..57207 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| LQ087_RS24930 (AI2602V1_4845) | 57204..57848 | - | 645 | WP_074169663.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LQ087_RS24935 | 57796..57963 | - | 168 | WP_230122454.1 | hypothetical protein | - |
| LQ087_RS24940 | 58427..58567 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| LQ087_RS24945 (AI2602V1_4847) | 58573..59277 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ087_RS24950 (AI2602V1_4848) | 59494..61212 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| LQ087_RS24955 (AI2602V1_4849) | 61209..61697 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| LQ087_RS24960 (AI2602V1_4850) | 61690..62673 | - | 984 | WP_001245143.1 | hypothetical protein | - |
| LQ087_RS24965 (AI2602V1_4851) | 62677..63591 | - | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| LQ087_RS24970 (AI2602V1_4852) | 63905..64213 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| LQ087_RS24975 (AI2602V1_4853) | 64206..64421 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| LQ087_RS24980 (AI2602V1_4854) | 64424..65086 | + | 663 | WP_000958205.1 | hypothetical protein | VF |
| LQ087_RS24985 (AI2602V1_4855) | 65097..65396 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| LQ087_RS24990 (AI2602V1_4856) | 65406..68156 | + | 2751 | WP_000153996.1 | Type IV secretion system protein virB4 | VF |
| LQ087_RS24995 (AI2602V1_4857) | 68175..68891 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| LQ087_RS25000 (AI2602V1_4858) | 68903..69187 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| LQ087_RS25005 (AI2602V1_4859) | 69205..70212 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| LQ087_RS25010 (AI2602V1_4860) | 70289..70429 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| LQ087_RS25015 (AI2602V1_4861) | 70422..71108 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| LQ087_RS25020 (AI2602V1_4862) | 71101..71994 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| LQ087_RS25025 (AI2602V1_4863) | 71991..73187 | + | 1197 | WP_000980841.1 | hypothetical protein | VF |
| LQ087_RS25030 (AI2602V1_4864) | 73191..74240 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| LQ087_RS25035 (AI2602V1_4865) | 74227..74628 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| LQ087_RS25040 (AI2602V1_4866) | 74719..75036 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LQ087_RS25045 (AI2602V1_4867) | 75063..75398 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| LQ087_RS25050 (AI2602V1_4868) | 75374..75682 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| LQ087_RS25055 (AI2602V1_4869) | 75679..77880 | + | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| LQ087_RS25060 (AI2602V1_4870) | 77877..78269 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| LQ087_RS25065 (AI2602V1_4871) | 78978..80885 | + | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LQ087_RS25070 (AI2602V1_4872) | 80900..81646 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| LQ087_RS25075 (AI2602V1_4873) | 81639..82166 | + | 528 | WP_001232861.1 | Cardiolipin synthase B | VF |
| LQ087_RS25080 (AI2602V1_4874) | 82198..82629 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| LQ087_RS25085 | 82761..82937 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| LQ087_RS25090 (AI2602V1_4875) | 83109..84074 | - | 966 | WP_000178515.1 | zincin-like metallopeptidase domain-containing protein | - |
| LQ087_RS25095 (AI2602V1_REPA000000061) | 84529..85749 | - | 1221 | Protein_95 | ISL3 family transposase ISKox3 | Transposase |
| LQ087_RS25100 (AI2602V1_4877) | 85850..86275 | + | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LQ087_RS25105 (AI2602V1_4878) | 86275..87546 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| LQ087_RS25110 (AI2602V1_4879) | 87625..87876 | + | 252 | WP_230122455.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LQ087_RS25115 (AI2602V1_4880) | 87930..88235 | + | 306 | WP_230122456.1 | hypothetical protein | - |
| LQ087_RS25120 (AI2602V1_4881) | 89312..90283 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LQ087_RS25125 (AI2602V1_4882) | 90283..91449 | - | 1167 | WP_000523812.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|