MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91756 bp
Accession: NZ_OU659115 Location: 1..91756 Organism: Providencia alcalifaciens strain 2019-04-27799-1-2 isolate 2019-04-27799-1-2 Replicon: plasmid 3
Accession: NZ_OU659115 Location: 1..91756 Organism: Providencia alcalifaciens strain 2019-04-27799-1-2 isolate 2019-04-27799-1-2 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO34_RS20070 (NVI2019_KOLGMIGM_04039) | 198..779 | - | 582 | WP_036982181.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LDO34_RS20075 (NVI2019_KOLGMIGM_04040) | 1189..2148 | - | 960 | WP_224051164.1 | ISNCY family transposase ISRor2 | VF |
| LDO34_RS21080 (NVI2019_KOLGMIGM_04041) | 2320..2703 | - | 384 | WP_263422650.1 | hypothetical protein | VF |
| LDO34_RS21085 (NVI2019_KOLGMIGM_04042) | 2709..3071 | - | 363 | WP_263422651.1 | hypothetical protein | VF |
| LDO34_RS20085 (NVI2019_KOLGMIGM_04043) | 3179..3484 | - | 306 | WP_224051165.1 | ProQ/FINO family protein | - |
| LDO34_RS20090 (NVI2019_KOLGMIGM_04044) | 4436..4684 | + | 249 | Protein_6 | IS3 family transposase ISYal1 | Transposase |
| LDO34_RS20095 (NVI2019_KOLGMIGM_04045) | 5439..14375 | + | 8937 | WP_224051166.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| LDO34_RS20100 (NVI2019_KOLGMIGM_04046) | 14576..15187 | - | 612 | WP_282563874.1 | ProQ/FINO family protein | - |
| LDO34_RS20105 (NVI2019_KOLGMIGM_04047) | 15803..16834 | - | 1032 | WP_282563875.1 | RepA family replication protein | - |
| LDO34_RS20110 (NVI2019_KOLGMIGM_04048) | 17565..18023 | + | 459 | WP_282563876.1 | helix-turn-helix transcriptional regulator | - |
| LDO34_RS20115 (NVI2019_KOLGMIGM_04049) | 18266..18658 | - | 393 | WP_224051170.1 | Mor transcription activator family protein | - |
| LDO34_RS20120 (NVI2019_KOLGMIGM_04050) | 18956..22213 | - | 3258 | WP_282563877.1 | hypothetical protein | VF |
| LDO34_RS20125 (NVI2019_KOLGMIGM_04051) | 22712..23710 | - | 999 | WP_224051172.1 | Ig-like domain-containing protein | - |
| LDO34_RS20130 (NVI2019_KOLGMIGM_04052) | 23959..24405 | + | 447 | WP_224055089.1 | mor transcription activator family protein | - |
| LDO34_RS20135 (NVI2019_KOLGMIGM_04053) | 24543..25112 | + | 570 | WP_224051174.1 | glycoside hydrolase family protein | - |
| LDO34_RS20140 (NVI2019_KOLGMIGM_04054) | 25105..25662 | + | 558 | WP_224051175.1 | lysis system i-spanin subunit Rz | - |
| LDO34_RS20145 (NVI2019_KOLGMIGM_04055) | 26083..27201 | + | 1119 | WP_224051176.1 | ETX/MTX2 family pore-forming toxin | - |
| LDO34_RS20150 (NVI2019_KOLGMIGM_04057) | 27591..28070 | + | 480 | WP_224051177.1 | hypothetical protein | - |
| LDO34_RS20155 | 28208..28413 | - | 206 | Protein_19 | transposase | - |
| LDO34_RS20160 (NVI2019_KOLGMIGM_04058) | 28946..30784 | - | 1839 | WP_282563878.1 | hypothetical protein | - |
| LDO34_RS20165 (NVI2019_KOLGMIGM_04059) | 30757..32892 | - | 2136 | WP_282563879.1 | hypothetical protein | - |
| LDO34_RS21245 | 34302..34424 | - | 123 | WP_263422652.1 | hypothetical protein | - |
| LDO34_RS20170 (NVI2019_KOLGMIGM_04060) | 35165..35452 | + | 288 | WP_224051180.1 | hypothetical protein | - |
| LDO34_RS20175 (NVI2019_KOLGMIGM_04062) | 36081..37025 | - | 945 | WP_224051181.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LDO34_RS20180 (NVI2019_KOLGMIGM_04063) | 37039..37809 | - | 771 | WP_224051182.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| LDO34_RS20185 | 38099..38608 | - | 510 | Protein_26 | Tn3 family transposase | - |
| LDO34_RS20190 | 38576..38686 | + | 111 | Protein_27 | resolvase | - |
| LDO34_RS20195 (NVI2019_KOLGMIGM_04064) | 38814..40760 | - | 1947 | WP_282563880.1 | hypothetical protein | - |
| LDO34_RS20200 (NVI2019_KOLGMIGM_04065) | 40733..41419 | - | 687 | WP_282563881.1 | hypothetical protein | - |
| LDO34_RS20210 (NVI2019_KOLGMIGM_04067) | 42011..42805 | - | 795 | WP_224051186.1 | DUF1460 domain-containing protein | - |
| LDO34_RS20215 | 43202..43537 | - | 336 | Protein_31 | CcdB family protein | - |
| LDO34_RS20220 (NVI2019_KOLGMIGM_04068) | 43662..44141 | - | 480 | WP_224051187.1 | GNAT family N-acetyltransferase | - |
| LDO34_RS20225 (NVI2019_KOLGMIGM_04069) | 44153..44407 | - | 255 | Protein_33 | DUF1778 domain-containing protein | - |
| LDO34_RS20230 (NVI2019_KOLGMIGM_04070) | 44595..45227 | + | 633 | WP_224051189.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LDO34_RS20235 (NVI2019_KOLGMIGM_04071) | 45474..47474 | - | 2001 | WP_282563882.1 | hypothetical protein | - |
| LDO34_RS20240 (NVI2019_KOLGMIGM_04072) | 48206..49153 | - | 948 | WP_224051132.1 | ISNCY family transposase ISPlu22 | VF |
| LDO34_RS20245 (NVI2019_KOLGMIGM_04073) | 49260..49880 | - | 621 | WP_224051133.1 | DUF2913 family protein | - |
| LDO34_RS20250 (NVI2019_KOLGMIGM_04074) | 49868..50440 | - | 573 | WP_282563863.1 | ProQ/FINO family protein | - |
| LDO34_RS20255 (NVI2019_KOLGMIGM_04075) | 51147..52085 | - | 939 | WP_224051135.1 | RepA family replication protein | - |
| LDO34_RS20260 (NVI2019_KOLGMIGM_04076) | 52492..57618 | - | 5127 | WP_224051136.1 | Multifunctional conjugation protein TraI | Relaxase |
| LDO34_RS20265 (NVI2019_KOLGMIGM_04077) | 57618..59831 | - | 2214 | WP_224051137.1 | type IV conjugative transfer system coupling protein TraD | - |
| LDO34_RS20270 (NVI2019_KOLGMIGM_04078) | 59894..60145 | - | 252 | WP_224051138.1 | hypothetical protein | - |
| LDO34_RS20280 (NVI2019_KOLGMIGM_04080) | 60338..60544 | - | 207 | WP_224051140.1 | TraR/DksA C4-type zinc finger protein | - |
| LDO34_RS20285 (NVI2019_KOLGMIGM_04081) | 60635..61132 | - | 498 | WP_224051141.1 | hypothetical protein | - |
| LDO34_RS20290 (NVI2019_KOLGMIGM_04082) | 61126..64020 | - | 2895 | WP_282563864.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LDO34_RS20295 (NVI2019_KOLGMIGM_04083) | 64033..65427 | - | 1395 | WP_282563883.1 | conjugal transfer pilus assembly protein TraH | - |
| LDO34_RS21250 (NVI2019_KOLGMIGM_04084) | 65833..65976 | - | 144 | WP_282563865.1 | hypothetical protein | Antitoxin Detail |
| LDO34_RS20305 (NVI2019_KOLGMIGM_04085) | 65976..66254 | - | 279 | WP_036974639.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO34_RS20310 (NVI2019_KOLGMIGM_04086) | 66245..66535 | - | 291 | WP_282563866.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LDO34_RS20315 (NVI2019_KOLGMIGM_04087) | 66638..67168 | - | 531 | WP_224051144.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LDO34_RS20320 (NVI2019_KOLGMIGM_04088) | 67174..67464 | - | 291 | WP_224051145.1 | hypothetical protein | - |
| LDO34_RS20325 (NVI2019_KOLGMIGM_04089) | 67485..68240 | - | 756 | WP_282490794.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LDO34_RS21255 | 68474..69415 | - | 942 | Protein_53 | conjugal transfer protein TraN | - |
| LDO34_RS20335 (NVI2019_KOLGMIGM_04091) | 70081..70716 | - | 636 | WP_282563867.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LDO34_RS20340 (NVI2019_KOLGMIGM_04092) | 70732..71727 | - | 996 | WP_224051149.1 | conjugal transfer pilus assembly protein TraU | - |
| LDO34_RS20345 (NVI2019_KOLGMIGM_04093) | 71715..72356 | - | 642 | WP_282563868.1 | type-F conjugative transfer system protein TraW | - |
| LDO34_RS20350 (NVI2019_KOLGMIGM_04094) | 72368..72784 | - | 417 | WP_224051151.1 | type-F conjugative transfer system protein TrbI | - |
| LDO34_RS20355 (NVI2019_KOLGMIGM_04095) | 72766..75474 | - | 2709 | WP_224051152.1 | type IV secretion system protein TraC | - |
| LDO34_RS20360 (NVI2019_KOLGMIGM_04096) | 75378..75956 | - | 579 | WP_282563884.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LDO34_RS20365 (NVI2019_KOLGMIGM_04097) | 76098..76585 | - | 488 | Protein_60 | transcription/translation regulatory transformer protein RfaH | - |
| LDO34_RS20370 (NVI2019_KOLGMIGM_04100) | 76792..78174 | - | 1383 | WP_282563869.1 | TrbI/VirB10 family protein | - |
| LDO34_RS20375 (NVI2019_KOLGMIGM_04101) | 78161..78901 | - | 741 | WP_224084822.1 | type-F conjugative transfer system secretin TraK | - |
| LDO34_RS20380 (NVI2019_KOLGMIGM_04102) | 78921..79490 | - | 570 | WP_036974625.1 | type IV conjugative transfer system protein TraE | - |
| LDO34_RS20385 (NVI2019_KOLGMIGM_04103) | 79505..79810 | - | 306 | WP_036974623.1 | type IV conjugative transfer system protein TraL | - |
| LDO34_RS20390 (NVI2019_KOLGMIGM_04104) | 79832..80194 | - | 363 | WP_036974622.1 | type IV conjugative transfer system pilin TraA | - |
| LDO34_RS20395 (NVI2019_KOLGMIGM_04105) | 80428..80619 | - | 192 | WP_224051154.1 | TraY domain-containing protein | - |
| LDO34_RS20400 (NVI2019_KOLGMIGM_04106) | 80636..81370 | - | 735 | WP_282563870.1 | helix-turn-helix transcriptional regulator | - |
| LDO34_RS20405 (NVI2019_KOLGMIGM_04107) | 81496..81822 | - | 327 | WP_282563871.1 | hypothetical protein | - |
| LDO34_RS20410 (NVI2019_KOLGMIGM_04108) | 81831..82214 | - | 384 | WP_224051157.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDO34_RS20415 (NVI2019_KOLGMIGM_04109) | 82718..83023 | + | 306 | WP_282563872.1 | hypothetical protein | VF |
| LDO34_RS20420 (NVI2019_KOLGMIGM_04110) | 83867..84346 | - | 480 | WP_224051159.1 | antirestriction protein | - |
| LDO34_RS20425 (NVI2019_KOLGMIGM_04111) | 84927..85736 | - | 810 | WP_224051160.1 | N-6 DNA methylase | - |
| LDO34_RS21260 | 85880..86443 | - | 564 | WP_282563873.1 | hypothetical protein | - |
| LDO34_RS20440 (NVI2019_KOLGMIGM_04113) | 86485..86736 | - | 252 | WP_036954407.1 | hypothetical protein | - |
| LDO34_RS20445 (NVI2019_KOLGMIGM_04114) | 87574..87783 | - | 210 | WP_224051162.1 | hypothetical protein | - |
| LDO34_RS20450 (NVI2019_KOLGMIGM_04115) | 88281..89249 | + | 969 | WP_036974617.1 | plasmid segregation protein ParM | - |
| LDO34_RS20455 (NVI2019_KOLGMIGM_04116) | 89249..89593 | + | 345 | WP_051420194.1 | plasmid partitioning/stability family protein | - |
| LDO34_RS20460 (NVI2019_KOLGMIGM_04117) | 89694..89948 | - | 255 | WP_224051163.1 | plasmid partition protein ParG | - |
| LDO34_RS20465 (NVI2019_KOLGMIGM_04118) | 89950..90573 | - | 624 | WP_036974649.1 | ParA family partition ATPase | - |
| LDO34_RS20470 (NVI2019_KOLGMIGM_04119) | 91273..91554 | - | 282 | WP_036979529.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|