MGE detailed information
MGE type: Genomic_island MGE length: 26904 bp
Accession: NZ_LT855380 Location: 564726..591629 Organism: Pseudomonas viridiflava strain CFBP 1590 isolate E12-5 Replicon: chromosome
Accession: NZ_LT855380 Location: 564726..591629 Organism: Pseudomonas viridiflava strain CFBP 1590 isolate E12-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFBP1590_RS02650 () | 560392..562476 | - | 2085 | WP_088234441.1 | chemotaxis protein CheA | - |
| CFBP1590_RS02655 () | 562519..562809 | - | 291 | WP_025993468.1 | STAS domain-containing protein | - |
| CFBP1590_RS02660 () | 562833..563201 | - | 369 | WP_004880039.1 | response regulator | - |
| CFBP1590_RS02665 () | 563211..564428 | - | 1218 | WP_088234442.1 | chemotaxis protein | - |
| CFBP1590_RS02670 () | 564726..564968 | - | 243 | WP_004880035.1 | hypothetical protein | - |
| CFBP1590_RS02675 () | 565056..565514 | - | 459 | WP_088234443.1 | VOC family protein | - |
| CFBP1590_RS02680 () | 565636..566070 | + | 435 | WP_058431054.1 | hypothetical protein | - |
| CFBP1590_RS02685 () | 566164..566790 | - | 627 | WP_069142817.1 | hydrolase | - |
| CFBP1590_RS02690 () | 567350..567586 | + | 237 | WP_029242333.1 | helix-turn-helix domain-containing protein | - |
| CFBP1590_RS02695 () | 567878..568114 | + | 237 | WP_088234444.1 | helix-turn-helix transcriptional regulator | - |
| CFBP1590_RS02700 () | 568195..569529 | - | 1335 | WP_043305479.1 | type II toxin-antitoxin system HipA family toxin | - |
| CFBP1590_RS02705 () | 569532..569792 | - | 261 | WP_004887765.1 | helix-turn-helix domain-containing protein | - |
| CFBP1590_RS02710 () | 570995..571348 | + | 354 | WP_088234445.1 | hypothetical protein | - |
| CFBP1590_RS02720 () | 572089..572643 | + | 555 | WP_088236350.1 | hypothetical protein | - |
| CFBP1590_RS02730 () | 572934..573311 | + | 378 | WP_088234447.1 | hypothetical protein | - |
| CFBP1590_RS02735 () | 573327..574277 | + | 951 | WP_024659454.1 | hypothetical protein | - |
| CFBP1590_RS02740 () | 574371..574622 | + | 252 | WP_122563396.1 | antirestriction protein ArdR | - |
| CFBP1590_RS02745 () | 574634..574882 | + | 249 | WP_024659453.1 | hypothetical protein | - |
| CFBP1590_RS02750 () | 575002..575262 | + | 261 | WP_024659452.1 | hypothetical protein | - |
| CFBP1590_RS02755 () | 575422..575676 | + | 255 | WP_024659451.1 | hypothetical protein | - |
| CFBP1590_RS27470 () | 575703..576074 | + | 372 | WP_145958166.1 | hypothetical protein | - |
| CFBP1590_RS02760 () | 576571..576954 | + | 384 | WP_010924788.1 | fluoride efflux transporter CrcB | - |
| CFBP1590_RS02765 () | 576965..577318 | + | 354 | WP_046235779.1 | DUF190 domain-containing protein | - |
| CFBP1590_RS02770 () | 577321..577866 | + | 546 | WP_010924789.1 | inorganic diphosphatase | - |
| CFBP1590_RS02775 () | 577866..578468 | + | 603 | WP_052739322.1 | uracil-DNA glycosylase | - |
| CFBP1590_RS02780 () | 578477..579646 | - | 1170 | WP_010924791.1 | TDT family transporter | - |
| CFBP1590_RS02785 () | 579764..580660 | + | 897 | WP_017709553.1 | LysR family transcriptional regulator | - |
| CFBP1590_RS02790 () | 580818..581810 | + | 993 | WP_017709554.1 | YncE family protein | - |
| CFBP1590_RS02795 () | 582135..582515 | + | 381 | WP_010924793.1 | hypothetical protein | - |
| CFBP1590_RS02800 () | 582996..583202 | + | 207 | WP_161806366.1 | hypothetical protein | - |
| CFBP1590_RS02805 () | 583231..584193 | - | 963 | WP_010924794.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CFBP1590_RS02810 () | 584530..584778 | + | 249 | WP_002556076.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| CFBP1590_RS02815 () | 584791..585141 | + | 351 | WP_003304103.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CFBP1590_RS02825 () | 585793..587178 | - | 1386 | WP_103365183.1 | P-type conjugative transfer protein TrbL | - |
| CFBP1590_RS02830 () | 587382..588137 | - | 756 | WP_088234448.1 | P-type conjugative transfer protein TrbJ | - |
| CFBP1590_RS02835 () | 588178..588552 | - | 375 | WP_088234449.1 | conjugal transfer transcriptional regulator TraJ | - |
| CFBP1590_RS02840 () | 588845..589123 | - | 279 | WP_088234450.1 | conjugal transfer protein TraK | - |
| CFBP1590_RS02845 () | 589190..589915 | - | 726 | WP_088236353.1 | phage replication protein | - |
| CFBP1590_RS02850 () | 590037..590255 | - | 219 | WP_003316232.1 | hypothetical protein | - |
| CFBP1590_RS02855 () | 590556..591629 | - | 1074 | WP_167383072.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CFBP1590_RS02865 () | 591888..594338 | - | 2451 | WP_167383073.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| CFBP1590_RS02870 () | 594758..596608 | - | 1851 | WP_058431050.1 | RNA polymerase sigma factor RpoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|