NZ_LT8538822036406..2072279

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 35874 bp
Accession: NZ_LT853882        Location: 2036406..2072279         Organism: Xanthomonas fragariae strain PD885       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

PD885_RS09475PD885_RS09480PD885_RS09485PD885_RS09495PD885_RS09530PD885_RS09535PD885_RS09540PD885_RS09545PD885_RS09550PD885_RS09555PD885_RS09560PD885_RS09565PD885_RS09570PD885_RS09575PD885_RS09585PD885_RS09590PD885_RS09600PD885_RS09605PD885_RS09610PD885_RS09615PD885_RS09625PD885_RS09635PD885_RS09640PD885_RS09645PD885_RS09650PD885_RS09655PD885_RS09660PD885_RS09665PD885_RS09670PD885_RS09675PD885_RS09680PD885_RS09490PD885_RS09500PD885_RS09505PD885_RS09510PD885_RS09515PD885_RS09520PD885_RS09525PD885_RS09580PD885_RS09595PD885_RS09620PD885_RS09630PD885_RS09685PD885_RS20655PD885_RS09695
Location: 2031451..2032287 (837 bp)
Type: Others
Protein ID: WP_088056827.1
Location: 2032314..2035451 (3138 bp)
Type: Others
Protein ID: WP_088057117.1
Location: 2035711..2036465 (755 bp)
Type: Others
Protein ID: Protein_1799
Location: 2038147..2038387 (241 bp)
Type: Others
Protein ID: Protein_1801
Location: 2043238..2043921 (684 bp)
Type: Others
Protein ID: WP_002805781.1
Location: 2044106..2045791 (1686 bp)
Type: Others
Protein ID: WP_002805780.1
Location: 2045880..2046191 (312 bp)
Type: Others
Protein ID: WP_002805779.1
Location: 2046260..2046565 (306 bp)
Type: Others
Protein ID: WP_002805777.1
Location: 2046572..2047750 (1179 bp)
Type: Others
Protein ID: WP_002805775.1
Location: 2047750..2048718 (969 bp)
Type: Others
Protein ID: WP_002805773.1
Location: 2048732..2050639 (1908 bp)
Type: VF
Protein ID: WP_002805772.1
Location: 2050639..2051532 (894 bp)
Type: VF
Protein ID: WP_002805770.1
Location: 2051686..2051973 (288 bp)
Type: Others
Protein ID: WP_108772763.1
Location: 2052079..2052725 (647 bp)
Type: Transposase
Protein ID: Protein_1817
Location: 2053740..2054834 (1095 bp)
Type: Transposase
Protein ID: Protein_1819
Location: 2054978..2056347 (1370 bp)
Type: Transposase
Protein ID: Protein_1820
Location: 2057077..2057961 (885 bp)
Type: Others
Protein ID: WP_002805762.1
Location: 2058065..2059522 (1458 bp)
Type: Others
Protein ID: WP_002805758.1
Location: 2059648..2061213 (1566 bp)
Type: Others
Protein ID: WP_002805756.1
Location: 2061521..2062732 (1212 bp)
Type: Integrase
Protein ID: WP_002805754.1
Location: 2063265..2064632 (1368 bp)
Type: Transposase
Protein ID: WP_088057118.1
Location: 2065792..2066025 (234 bp)
Type: Others
Protein ID: WP_002805742.1
Location: 2066029..2066907 (879 bp)
Type: Others
Protein ID: WP_002805739.1
Location: 2066879..2067766 (888 bp)
Type: Others
Protein ID: WP_172404498.1
Location: 2068428..2068709 (282 bp)
Type: Others
Protein ID: WP_002805735.1
Location: 2069121..2069375 (255 bp)
Type: Antitoxin
Protein ID: WP_002805732.1
Location: 2069372..2069791 (420 bp)
Type: Toxin
Protein ID: WP_002805728.1
Location: 2069948..2070562 (615 bp)
Type: Others
Protein ID: WP_040762517.1
Location: 2070648..2070890 (243 bp)
Type: Transposase
Protein ID: Protein_1836
Location: 2071008..2072375 (1368 bp)
Type: Others
Protein ID: WP_088056828.1
Location: 2072398..2073303 (906 bp)
Type: Others
Protein ID: Protein_1838
Location: 2036649..2038016 (1368 bp)
Type: Transposase
Protein ID: WP_088057118.1
Location: 2038537..2039757 (1221 bp)
Type: Others
Protein ID: WP_172402121.1
Location: 2039762..2040160 (399 bp)
Type: Others
Protein ID: WP_002805788.1
Location: 2040165..2041049 (885 bp)
Type: Others
Protein ID: WP_002805787.1
Location: 2041127..2042161 (1035 bp)
Type: Others
Protein ID: WP_002805785.1
Location: 2042387..2042689 (303 bp)
Type: Others
Protein ID: WP_002805783.1
Location: 2042935..2043060 (126 bp)
Type: Others
Protein ID: WP_002805782.1
Location: 2052752..2053676 (925 bp)
Type: Transposase
Protein ID: Protein_1818
Location: 2056707..2057027 (321 bp)
Type: Others
Protein ID: WP_002805766.1
Location: 2062816..2063073 (258 bp)
Type: Others
Protein ID: WP_002805752.1
Location: 2064706..2065710 (1005 bp)
Type: Others
Protein ID: WP_002805744.1
Location: 2073548..2074923 (1376 bp)
Type: Others
Protein ID: Protein_1839
Location: 2075328..2076200 (873 bp)
Type: Others
Protein ID: WP_145954097.1
Location: 2077069..2077070 (2 bp)
Type: Others
Protein ID: WP_088056830.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
PD885_RS09475 ()2031451..2032287+837WP_088056827.1carbohydrate ABC transporter permease-
PD885_RS09480 ()2032314..2035451+3138WP_088057117.1discoidin domain-containing protein-
PD885_RS09485 ()2035711..2036465+755Protein_1799transposase-
PD885_RS09490 ()2036649..2038016-1368WP_088057118.1IS5 family transposase IS1478Transposase
PD885_RS09495 ()2038147..2038387+241Protein_1801endonuclease/exonuclease/phosphatase family protein-
PD885_RS09500 ()2038537..2039757-1221WP_172402121.1TraB/GumN family protein-
PD885_RS09505 ()2039762..2040160-399WP_002805788.1hypothetical protein-
PD885_RS09510 ()2040165..2041049-885WP_002805787.1carbon-nitrogen hydrolase-
PD885_RS09515 ()2041127..2042161-1035WP_002805785.1agmatine deiminase family protein-
PD885_RS09520 ()2042387..2042689-303WP_002805783.1hypothetical protein-
PD885_RS09525 ()2042935..2043060-126WP_002805782.1type B 50S ribosomal protein L36-
PD885_RS09530 ()2043238..2043921+684WP_002805781.1(d)CMP kinase-
PD885_RS09535 ()2044106..2045791+1686WP_002805780.130S ribosomal protein S1-
PD885_RS09540 ()2045880..2046191+312WP_002805779.1integration host factor subunit beta-
PD885_RS09545 ()2046260..2046565+306WP_002805777.1LapA family protein-
PD885_RS09550 ()2046572..2047750+1179WP_002805775.1lipopolysaccharide assembly protein LapB-
PD885_RS09555 ()2047750..2048718+969WP_002805773.1glycosyltransferase family 4 protein-
PD885_RS09560 ()2048732..2050639+1908WP_002805772.1hypothetical proteinVF
PD885_RS09565 ()2050639..2051532+894WP_002805770.1hypothetical proteinVF
PD885_RS09570 ()2051686..2051973+288WP_108772763.1cation:proton antiporter-
Showing 1 to 20 of 45 rows
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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
No matching records found