MGE detailed information
MGE type: Genomic_island MGE length: 28676 bp
Accession: NZ_LT838200 Location: 2370029..2398704 Organism: Escherichia coli isolate WI2 isolate Replicon: chromosome
Accession: NZ_LT838200 Location: 2370029..2398704 Organism: Escherichia coli isolate WI2 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSZ51_RS12235 () | 2370029..2370295 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| DSZ51_RS12240 () | 2370295..2371617 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| DSZ51_RS12250 () | 2371929..2372137 | + | 209 | Protein_2261 | AraC family transcriptional regulator | - |
| DSZ51_RS12255 () | 2372392..2372784 | + | 393 | Protein_2262 | hypothetical protein | VF |
| DSZ51_RS12260 () | 2372818..2375703 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| DSZ51_RS12265 () | 2375829..2376452 | + | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| DSZ51_RS12270 () | 2376483..2377612 | + | 1130 | WP_085967404.1 | IS3 family transposase IS1133 | Transposase |
| DSZ51_RS12280 () | 2377682..2378890 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| DSZ51_RS12285 () | 2378900..2379271 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| DSZ51_RS12290 () | 2379404..2379997 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| DSZ51_RS12295 () | 2380110..2381315 | - | 1206 | WP_001089072.1 | Tetracycline resistance protein, class B | ARG |
| DSZ51_RS12300 () | 2381397..2382020 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| DSZ51_RS12305 () | 2381998..2382684 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| DSZ51_RS12310 () | 2382692..2383078 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| DSZ51_RS12315 () | 2383071..2383391 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| DSZ51_RS12320 () | 2383835..2385040 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| DSZ51_RS12325 () | 2385271..2385390 | + | 120 | Protein_2275 | LysR family transcriptional regulator | - |
| DSZ51_RS12330 () | 2385406..2386614 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| DSZ51_RS12340 () | 2386900..2387703 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DSZ51_RS12345 () | 2387703..2388539 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DSZ51_RS12350 () | 2388645..2389484 | + | 840 | Protein_2279 | Outer membrane usher protein FimD | VF |
| DSZ51_RS12355 () | 2389498..2390028 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| DSZ51_RS12360 () | 2390041..2390544 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| DSZ51_RS12365 () | 2390603..2391517 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| DSZ51_RS12370 () | 2391851..2394130 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| DSZ51_RS12375 () | 2394378..2394575 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| DSZ51_RS12380 () | 2394650..2395411 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| DSZ51_RS12385 () | 2395813..2397495 | + | 1683 | WP_001295684.1 | sulfatase | - |
| DSZ51_RS12390 () | 2397547..2398704 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| DSZ51_RS26565 () | 2398670..2398792 | - | 123 | WP_120795387.1 | protein YneP | - |
| DSZ51_RS12395 () | 2398995..2400680 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| DSZ51_RS12400 () | 2400718..2403090 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|