MGE detailed information
MGE type: Conjugative plasmid MGE length: 60622 bp
Accession: NZ_LT838198 Location: 1..60622 Organism: Escherichia coli isolate WI1 isolate Replicon: plasmid pWI1-incFII
Accession: NZ_LT838198 Location: 1..60622 Organism: Escherichia coli isolate WI1 isolate Replicon: plasmid pWI1-incFII
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WI2_RS26900 () | 1..858 | + | 858 | WP_000131006.1 | incFII family plasmid replication initiator RepA | - |
| WI2_RS25075 () | 1772..2041 | + | 270 | WP_061360246.1 | hypothetical protein | Antitoxin Detail |
| WI2_RS25080 () | 2038..2319 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| WI2_RS25085 () | 2583..3770 | + | 1188 | WP_085543286.1 | hypothetical protein | - |
| WI2_RS25090 () | 3859..4779 | + | 921 | WP_085543287.1 | hypothetical protein | VF |
| WI2_RS25095 () | 4921..5316 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| WI2_RS25100 () | 5316..6275 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| WI2_RS25105 () | 6714..7616 | + | 903 | WP_064226247.1 | DUF1281 domain-containing protein | - |
| WI2_RS25110 () | 7613..7924 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| WI2_RS25115 () | 8000..8683 | + | 684 | WP_085543288.1 | DNA methylase | - |
| WI2_RS25120 () | 8684..8905 | + | 222 | WP_021560304.1 | hypothetical protein | - |
| WI2_RS25125 () | 8799..9353 | + | 555 | WP_085543289.1 | DUF1380 family protein | - |
| WI2_RS26905 () | 9404..10183 | + | 780 | WP_197687225.1 | hypothetical protein | - |
| WI2_RS25140 () | 10720..11022 | + | 303 | WP_085543302.1 | antirestriction protein | - |
| WI2_RS25145 () | 11069..11491 | + | 423 | WP_085543290.1 | DUF1380 family protein | - |
| WI2_RS25150 () | 11488..11679 | + | 192 | WP_085543291.1 | hypothetical protein | - |
| WI2_RS26910 () | 11658..12192 | - | 535 | Protein_17 | hypothetical protein | - |
| WI2_RS25170 () | 12709..12939 | + | 231 | WP_085543292.1 | hypothetical protein | - |
| WI2_RS25175 () | 12991..14352 | + | 1362 | WP_024243981.1 | DUF3560 domain-containing protein | - |
| WI2_RS25180 () | 14399..14962 | + | 564 | WP_001316841.1 | class I SAM-dependent methyltransferase | - |
| WI2_RS25205 () | 15828..16355 | + | 528 | WP_001493864.1 | single-stranded DNA-binding protein | - |
| WI2_RS25210 () | 16413..16646 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| WI2_RS25215 () | 16710..18668 | + | 1959 | WP_085543295.1 | ParB/RepB/Spo0J family partition protein | - |
| WI2_RS25220 () | 18723..19157 | + | 435 | WP_085543296.1 | conjugation system SOS inhibitor PsiB | - |
| WI2_RS25225 () | 19154..19873 | + | 720 | WP_085543297.1 | plasmid SOS inhibition protein A | - |
| WI2_RS25230 () | 19873..20391 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - () | 20367..20515 | + | 149 | NuclAT_0 | - | - |
| - () | 20367..20515 | + | 149 | NuclAT_0 | - | - |
| - () | 20367..20515 | + | 149 | NuclAT_0 | - | - |
| - () | 20367..20515 | + | 149 | NuclAT_0 | - | - |
| WI2_RS25240 () | 20567..20725 | + | 159 | WP_024200877.1 | type I toxin-antitoxin system Hok family toxin | - |
| WI2_RS25255 () | 21659..21955 | + | 297 | WP_024200873.1 | hypothetical protein | - |
| WI2_RS25260 () | 22063..22884 | + | 822 | WP_141075400.1 | DUF945 domain-containing protein | - |
| WI2_RS25265 () | 23182..23691 | - | 510 | WP_000759176.1 | hypothetical protein | VF |
| WI2_RS25270 () | 24105..24488 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| WI2_RS25275 () | 24675..25364 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| WI2_RS25280 () | 25463..25858 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| WI2_RS25285 () | 25891..26250 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| WI2_RS25290 () | 26265..26576 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| WI2_RS25295 () | 26598..27164 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| WI2_RS25300 () | 27175..27879 | + | 705 | WP_149021906.1 | type-F conjugative transfer system secretin TraK | - |
| WI2_RS25305 () | 27879..29306 | + | 1428 | WP_021545202.1 | conjugal transfer protein TraB | - |
| WI2_RS25310 () | 29296..29880 | + | 585 | WP_021545201.1 | conjugal transfer protein TraP | - |
| WI2_RS25315 () | 29819..30187 | + | 369 | WP_071780811.1 | conjugal transfer protein TrbD | - |
| WI2_RS25320 () | 30180..30431 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| WI2_RS25325 () | 30428..30943 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| WI2_RS25330 () | 31078..31299 | + | 222 | WP_072113546.1 | conjugal transfer protein TraR | - |
| WI2_RS25340 () | 31692..34322 | + | 2631 | WP_021545198.1 | type IV secretion system protein TraC | - |
| WI2_RS25345 () | 34319..34705 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| WI2_RS25350 () | 34702..35334 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| WI2_RS25355 () | 35331..36323 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| WI2_RS25360 () | 36349..36810 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| WI2_RS25365 () | 36840..37292 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| WI2_RS25370 () | 37320..37958 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| WI2_RS25375 () | 37955..39763 | + | 1809 | WP_085543298.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| WI2_RS25380 () | 39790..40047 | + | 258 | WP_000864336.1 | conjugal transfer protein TrbE | - |
| WI2_RS25385 () | 40040..40783 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| WI2_RS25390 () | 40799..41146 | + | 348 | WP_001287902.1 | conjugal transfer protein TrbA | - |
| WI2_RS25395 () | 41265..41549 | + | 285 | WP_085432043.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| WI2_RS25400 () | 41536..42081 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| WI2_RS25405 () | 42011..42373 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| WI2_RS25410 () | 42373..43746 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| WI2_RS25415 () | 43743..46568 | + | 2826 | WP_001554363.1 | conjugal transfer mating pair stabilization protein TraG | - |
| WI2_RS25420 () | 46565..47074 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| WI2_RS25425 () | 47088..47819 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| WI2_RS25430 () | 48071..50278 | + | 2208 | WP_085543299.1 | type IV conjugative transfer system coupling protein TraD | - |
| WI2_RS25435 () | 50278..55548 | + | 5271 | WP_085543300.1 | Multifunctional conjugation protein TraI | Relaxase |
| WI2_RS25440 () | 55568..56314 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| WI2_RS25445 () | 56373..57233 | + | 861 | WP_085543301.1 | Quorum-quenching protein AidA | VF |
| WI2_RS25450 () | 57336..57896 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| WI2_RS25455 () | 58029..58187 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| WI2_RS25465 () | 58486..58947 | + | 462 | WP_021545193.1 | thermonuclease family protein | - |
| WI2_RS25470 () | 58993..59202 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| WI2_RS25475 () | 59240..59830 | + | 591 | WP_021545192.1 | DUF2726 domain-containing protein | - |
| WI2_RS25480 () | 60070..60330 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|