MGE detailed information
MGE type: Genomic_island MGE length: 28676 bp
Accession: NZ_LT838196 Location: 2367157..2395832 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Accession: NZ_LT838196 Location: 2367157..2395832 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WI2_RS12205 () | 2367157..2367423 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| WI2_RS12210 () | 2367423..2368745 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| WI2_RS12220 () | 2369057..2369265 | + | 209 | Protein_2261 | helix-turn-helix transcriptional regulator | - |
| WI2_RS12225 () | 2369520..2369912 | + | 393 | Protein_2262 | hypothetical protein | VF |
| WI2_RS12230 () | 2369946..2372831 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| WI2_RS12235 () | 2372957..2373580 | + | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| WI2_RS12240 () | 2373611..2374740 | + | 1130 | WP_085967404.1 | IS3 family transposase IS1133 | Transposase |
| WI2_RS12250 () | 2374810..2376018 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| WI2_RS12255 () | 2376028..2376399 | - | 372 | WP_035689358.1 | hypothetical protein | VF |
| WI2_RS12260 () | 2376532..2377125 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| WI2_RS12265 () | 2377238..2378443 | - | 1206 | WP_001089072.1 | hypothetical protein | ARG |
| WI2_RS12270 () | 2378525..2379148 | + | 624 | WP_000088605.1 | hypothetical protein | VF |
| WI2_RS12275 () | 2379126..2379812 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| WI2_RS12280 () | 2379820..2380206 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| WI2_RS12285 () | 2380199..2380519 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| WI2_RS12290 () | 2380963..2382168 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| WI2_RS12295 () | 2382399..2382518 | + | 120 | Protein_2275 | LysR family transcriptional regulator | - |
| WI2_RS12300 () | 2382534..2383742 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| WI2_RS12305 () | 2384028..2384831 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| WI2_RS12310 () | 2384831..2385667 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| WI2_RS12320 () | 2385773..2386612 | + | 840 | Protein_2279 | hypothetical protein | VF |
| WI2_RS12325 () | 2386626..2387156 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| WI2_RS12330 () | 2387169..2387672 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| WI2_RS12335 () | 2387731..2388645 | + | 915 | WP_000520662.1 | hypothetical protein | VF |
| WI2_RS12340 () | 2388979..2391258 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| WI2_RS12345 () | 2391506..2391703 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| WI2_RS12350 () | 2391778..2392539 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| WI2_RS12355 () | 2392941..2394623 | + | 1683 | WP_001295684.1 | sulfatase | - |
| WI2_RS12360 () | 2394675..2395832 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| WI2_RS26290 () | 2395798..2395920 | - | 123 | WP_120795387.1 | protein YneP | - |
| WI2_RS12365 () | 2396123..2397808 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| WI2_RS12370 () | 2397846..2400218 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|