MGE detailed information
MGE type: Prophage MGE length: 46413 bp
Accession: NZ_LT795502 Location: 2350931..2397343 Organism: Escherichia coli strain KV7 isolate KV7 Replicon: chromosome
Accession: NZ_LT795502 Location: 2350931..2397343 Organism: Escherichia coli strain KV7 isolate KV7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJB12_RS11295 (2347180) | 2347180..2349606 | - | 2427 | WP_213222169.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KJB12_RS11300 (2349805) | 2349805..2350110 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KJB12_RS11305 (2350218) | 2350218..2350928 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KJB12_RS11310 (2350931) | 2350931..2351491 | - | 561 | WP_213222170.1 | spermidine N1-acetyltransferase | - |
| KJB12_RS11315 (2351526) | 2351526..2351867 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KJB12_RS11320 (2352002) | 2352002..2352352 | + | 351 | WP_000598291.1 | YnfA family protein | - |
| KJB12_RS11325 (2352533) | 2352533..2353747 | + | 1215 | WP_024257740.1 | starvation-sensing protein RspA | - |
| KJB12_RS11330 (2353759) | 2353759..2354778 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| KJB12_RS11340 (2354966) | 2354966..2356246 | - | 1281 | WP_000876997.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KJB12_RS11345 (2356281) | 2356281..2356394 | - | 114 | Protein_2227 | excisionase family protein | - |
| KJB12_RS11350 (2356516) | 2356516..2357496 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| KJB12_RS11355 (2357567) | 2357567..2357731 | - | 165 | Protein_2229 | excisionase family protein | - |
| KJB12_RS11360 (2357804) | 2357804..2360275 | - | 2472 | WP_044862779.1 | exonuclease | - |
| KJB12_RS11365 (2360369) | 2360369..2360560 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| KJB12_RS11370 (2360557) | 2360557..2360745 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KJB12_RS27110 (2361706) | 2361706..2361807 | - | 102 | Protein_2233 | protein YdfB | - |
| KJB12_RS11380 (2361809) | 2361809..2361964 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| KJB12_RS11385 (2362157) | 2362157..2362564 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| KJB12_RS11390 (2362642) | 2362642..2362869 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| KJB12_RS11395 (2362853) | 2362853..2363374 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| KJB12_RS11400 (2363355) | 2363355..2364320 | + | 966 | WP_000054506.1 | hypothetical protein | - |
| KJB12_RS11405 (2364361) | 2364361..2364780 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| KJB12_RS11410 (2364835) | 2364835..2365932 | + | 1098 | Protein_2240 | ISNCY family transposase ISCARN112 | Transposase |
| KJB12_RS26855 (2366005) | 2366005..2366154 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| KJB12_RS11415 (2366591) | 2366591..2366923 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KJB12_RS11420 (2367126) | 2367126..2367431 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KJB12_RS11425 (2367456) | 2367456..2367695 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KJB12_RS11430 (2367695) | 2367695..2367982 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KJB12_RS11435 (2368054) | 2368054..2368209 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KJB12_RS11440 (2368426) | 2368426..2368677 | + | 252 | WP_000981000.1 | protein Rem | - |
| KJB12_RS11445 (2368744) | 2368744..2369022 | + | 279 | WP_032140164.1 | hypothetical protein | - |
| KJB12_RS11450 (2369024) | 2369024..2370073 | + | 1050 | WP_001265195.1 | DUF968 domain-containing protein | - |
| KJB12_RS11455 (2370087) | 2370087..2370839 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KJB12_RS11460 (2371117) | 2371117..2371206 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KJB12_RS11465 (2371261) | 2371261..2371473 | - | 213 | WP_000087757.1 | cold shock-like protein CspF | - |
| KJB12_RS11470 (2371774) | 2371774..2371989 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KJB12_RS11475 (2372353) | 2372353..2372523 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| KJB12_RS11480 (2372743) | 2372743..2372958 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KJB12_RS11485 (2372963) | 2372963..2373274 | + | 312 | WP_000189914.1 | YdfR family protein | - |
| KJB12_RS11490 (2373271) | 2373271..2373804 | + | 534 | WP_001092971.1 | lysozyme | - |
| KJB12_RS11495 (2373801) | 2373801..2374298 | + | 498 | WP_001071767.1 | DUF2514 domain-containing protein | - |
| KJB12_RS11500 (2374662) | 2374662..2374874 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KJB12_RS11505 (2374885) | 2374885..2375073 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KJB12_RS11510 (2375076) | 2375076..2375141 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| KJB12_RS11515 (2375146) | 2375146..2375376 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KJB12_RS11520 (2375548) | 2375548..2375721 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KJB12_RS11525 (2375873) | 2375873..2376283 | - | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| KJB12_RS11530 (2376584) | 2376584..2376790 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| KJB12_RS11535 (2377363) | 2377363..2377890 | + | 528 | WP_001389340.1 | DUF1441 family protein | - |
| KJB12_RS11540 (2377899) | 2377899..2379998 | + | 2100 | WP_000507036.1 | phage terminase large subunit family protein | - |
| KJB12_RS11545 (2379995) | 2379995..2380207 | + | 213 | WP_001072973.1 | hypothetical protein | - |
| KJB12_RS11550 (2380207) | 2380207..2381715 | + | 1509 | WP_000985931.1 | phage portal protein | - |
| KJB12_RS11555 (2381660) | 2381660..2383315 | + | 1656 | Protein_2270 | ATP-dependent Clp protease proteolytic subunit | VF |
| KJB12_RS11560 (2383315) | 2383315..2384334 | + | 1020 | Protein_2271 | phage tail protein | - |
| KJB12_RS11565 (2384334) | 2384334..2384909 | + | 576 | WP_000885614.1 | tail fiber assembly protein | - |
| KJB12_RS11570 (2385007) | 2385007..2385597 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KJB12_RS11575 (2385914) | 2385914..2386147 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KJB12_RS11580 (2386216) | 2386216..2386329 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KJB12_RS11585 (2386931) | 2386931..2388214 | + | 1284 | Protein_2276 | MHS family MFS transporter YdfJ | - |
| KJB12_RS11590 (2388303) | 2388303..2389763 | + | 1461 | WP_000527836.1 | mannitol dehydrogenase family protein | - |
| KJB12_RS11595 (2389799) | 2389799..2390002 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KJB12_RS11600 (2390179) | 2390179..2390865 | - | 687 | WP_000215556.1 | DNA-binding transcriptional regulator rspR | - |
| KJB12_RS11605 (2390954) | 2390954..2391700 | - | 747 | WP_000636575.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| KJB12_RS11610 (2391837) | 2391837..2393882 | + | 2046 | WP_024257804.1 | peptidyl-dipeptidase Dcp | - |
| KJB12_RS11615 (2393927) | 2393927..2394445 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| KJB12_RS11620 (2394721) | 2394721..2395113 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| KJB12_RS11625 (2395368) | 2395368..2396258 | + | 891 | WP_000592844.1 | diguanylate cyclase DgcZ | - |
| KJB12_RS11630 (2396373) | 2396373..2396477 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KJB12_RS11635 (2396477) | 2396477..2396572 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KJB12_RS11640 (2396646) | 2396646..2397343 | + | 698 | WP_236923372.1 | IS1 family transposase | - |
| KJB12_RS11645 (2397476) | 2397476..2398663 | - | 1188 | WP_021577478.1 | efflux MFS transporter YdeE | - |
| KJB12_RS11650 (2398858) | 2398858..2399757 | + | 900 | WP_000087193.1 | O-acetylserine/cysteine exporter | - |
| KJB12_RS11655 (2399788) | 2399788..2400006 | - | 219 | WP_000803524.1 | multiple antibiotic resistance protein MarB | - |
| KJB12_RS11660 (2400038) | 2400038..2400421 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| KJB12_RS11665 (2400441) | 2400441..2400875 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| KJB12_RS11670 (2401087) | 2401087..2401752 | + | 666 | WP_000885019.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|