MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_LT615378 Location: 3264366..3285297 Organism: Escherichia coli isolate 103 Replicon: chromosome
Accession: NZ_LT615378 Location: 3264366..3285297 Organism: Escherichia coli isolate 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV310_RS17315 () | 3260198..3261529 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| BV310_RS17320 () | 3261551..3262540 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| BV310_RS17325 () | 3262639..3263577 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| BV310_RS25605 () | 3263892..3264110 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| BV310_RS17335 () | 3264366..3264905 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| BV310_RS17340 () | 3264927..3266114 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| BV310_RS17350 () | 3267137..3268282 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| BV310_RS17355 () | 3268379..3269269 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| BV310_RS17360 () | 3269299..3270069 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| BV310_RS17365 () | 3270085..3271419 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| BV310_RS17370 () | 3271794..3273365 | + | 1572 | WP_075328803.1 | galactarate dehydratase | - |
| BV310_RS17375 () | 3273514..3273849 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| BV310_RS17380 () | 3273849..3274313 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| BV310_RS17385 () | 3274368..3275177 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| BV310_RS17395 () | 3275426..3276706 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| BV310_RS17400 () | 3276729..3277202 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BV310_RS17405 () | 3277213..3277584 | + | 372 | Protein_3117 | PTS sugar transporter subunit IIC | - |
| BV310_RS17410 () | 3277580..3278137 | + | 558 | Protein_3118 | amidohydrolase family protein | - |
| BV310_RS17415 () | 3278488..3279642 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| BV310_RS17420 () | 3279655..3280515 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| BV310_RS17425 () | 3280682..3281158 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| BV310_RS17430 () | 3281197..3282000 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| BV310_RS17435 () | 3281990..3282781 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| BV310_RS17440 () | 3282782..3283537 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| BV310_RS17445 () | 3283938..3284522 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| BV310_RS17450 () | 3284602..3285297 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| BV310_RS17455 () | 3285326..3287842 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| BV310_RS17460 () | 3287853..3288944 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| BV310_RS17465 () | 3288987..3289847 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|