MGE detailed information
MGE type: Genomic_island MGE length: 20421 bp
Accession: NZ_LS999560 Location: 4251912..4272332 Organism: Escherichia coli isolate EC-TO143 Replicon: chromosome
Accession: NZ_LS999560 Location: 4251912..4272332 Organism: Escherichia coli isolate EC-TO143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO143_RS21135 () | 4249519..4250244 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ECTO143_RS21140 () | 4250281..4250820 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| ECTO143_RS21145 () | 4250885..4251433 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| ECTO143_RS21150 () | 4251912..4252508 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| ECTO143_RS21155 () | 4252986..4253393 | - | 408 | Protein_4057 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO143_RS21160 () | 4253493..4254011 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| ECTO143_RS21165 () | 4254030..4255250 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| ECTO143_RS21170 () | 4255281..4255478 | - | 198 | Protein_4060 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO143_RS21175 () | 4256932..4257648 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECTO143_RS21180 () | 4257668..4258774 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| ECTO143_RS21185 () | 4258838..4259818 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECTO143_RS21190 () | 4260401..4261507 | - | 1107 | Protein_4064 | DNA helicase | - |
| ECTO143_RS21195 () | 4261570..4262717 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| ECTO143_RS21200 () | 4262750..4262914 | + | 165 | Protein_4066 | GNAT family N-acetyltransferase | - |
| ECTO143_RS21205 () | 4263291..4263548 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| ECTO143_RS21210 () | 4263560..4264111 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| ECTO143_RS21215 () | 4264163..4264909 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| ECTO143_RS21220 () | 4265037..4265297 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| ECTO143_RS27200 () | 4265335..4265451 | + | 117 | Protein_4071 | VOC family protein | - |
| ECTO143_RS21225 () | 4265696..4266817 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| ECTO143_RS21230 () | 4266814..4267092 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECTO143_RS21235 () | 4267104..4268417 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECTO143_RS21240 () | 4268430..4269236 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECTO143_RS21245 () | 4269367..4269798 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| ECTO143_RS21250 () | 4269810..4270442 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECTO143_RS21255 () | 4270459..4271241 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECTO143_RS21260 () | 4271544..4272332 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| ECTO143_RS21265 () | 4272337..4273242 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| ECTO143_RS21270 () | 4273253..4275220 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| ECTO143_RS21275 () | 4275327..4276676 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|