MGE detailed information
MGE type: Genomic_island MGE length: 48969 bp
Accession: NZ_LS999560 Location: 3796047..3845015 Organism: Escherichia coli isolate EC-TO143 Replicon: chromosome
Accession: NZ_LS999560 Location: 3796047..3845015 Organism: Escherichia coli isolate EC-TO143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO143_RS18925 () | 3792248..3792835 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| ECTO143_RS18930 () | 3792849..3794321 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| ECTO143_RS18935 () | 3794335..3796005 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| ECTO143_RS18945 () | 3797090..3797653 | + | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| ECTO143_RS18950 () | 3797983..3798777 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| ECTO143_RS18955 () | 3798931..3799692 | + | 762 | WP_001213045.1 | protein HyxA | - |
| ECTO143_RS18960 () | 3799734..3800810 | + | 1077 | Protein_3633 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| ECTO143_RS18965 () | 3800832..3802025 | + | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| ECTO143_RS18970 () | 3802209..3802877 | + | 669 | WP_001005267.1 | membrane protein | - |
| ECTO143_RS18975 () | 3803120..3803815 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| ECTO143_RS18980 () | 3803808..3805235 | - | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| ECTO143_RS18985 () | 3805246..3805965 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| ECTO143_RS18990 () | 3806491..3807345 | - | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| ECTO143_RS18995 () | 3807572..3808897 | + | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| ECTO143_RS19000 () | 3809006..3809242 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| ECTO143_RS19005 () | 3809254..3809847 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| ECTO143_RS19010 () | 3810007..3810876 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| ECTO143_RS19015 () | 3811124..3811981 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| ECTO143_RS19025 () | 3812106..3816353 | - | 4248 | WP_000092552.1 | hypothetical protein | VF |
| ECTO143_RS19030 () | 3816919..3817770 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| ECTO143_RS19035 () | 3817797..3818786 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| ECTO143_RS19040 () | 3818817..3819710 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| ECTO143_RS19045 () | 3819910..3820836 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| ECTO143_RS19050 () | 3820993..3821913 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| ECTO143_RS19055 () | 3822086..3823228 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| ECTO143_RS19060 () | 3823701..3823802 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| ECTO143_RS19065 () | 3824167..3824430 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| ECTO143_RS19070 () | 3824430..3824570 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| ECTO143_RS19075 () | 3824640..3824830 | - | 191 | Protein_3655 | hypothetical protein | - |
| ECTO143_RS19085 () | 3825654..3826196 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| ECTO143_RS19090 () | 3826271..3826858 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| ECTO143_RS19095 () | 3826915..3827583 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| ECTO143_RS19100 () | 3827609..3830134 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| ECTO143_RS19105 () | 3830124..3831767 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| ECTO143_RS19110 () | 3831736..3832446 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| ECTO143_RS19115 () | 3832753..3833082 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| ECTO143_RS19120 () | 3833094..3833257 | - | 164 | Protein_3663 | tail fiber assembly protein | - |
| ECTO143_RS19125 () | 3833331..3833945 | - | 615 | WP_001019923.1 | YagU family protein | - |
| ECTO143_RS19130 () | 3834160..3834345 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| ECTO143_RS27060 () | 3834394..3834552 | + | 159 | Protein_3666 | integrase | - |
| ECTO143_RS19140 () | 3834779..3835114 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| ECTO143_RS19145 () | 3835322..3836098 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| ECTO143_RS19150 () | 3836263..3837183 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| ECTO143_RS19155 () | 3837170..3837952 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| ECTO143_RS19160 () | 3838236..3841334 | + | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| ECTO143_RS19165 () | 3841328..3842965 | + | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| ECTO143_RS19170 () | 3842955..3844202 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| ECTO143_RS27180 () | 3844382..3844567 | + | 186 | WP_101918754.1 | ash family protein | - |
| ECTO143_RS19180 () | 3844545..3845015 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| ECTO143_RS19190 () | 3845161..3845364 | + | 204 | Protein_3676 | integrase | - |
| ECTO143_RS19200 () | 3845569..3846822 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ECTO143_RS19205 () | 3846834..3847937 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ECTO143_RS19210 () | 3848226..3849281 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| ECTO143_RS19215 () | 3849320..3849721 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|