MGE detailed information
MGE type: Conjugative plasmid MGE length: 96986 bp
Accession: NZ_LS992188 Location: 1..96986 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 4
Accession: NZ_LS992188 Location: 1..96986 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC3426_RS25740 () | 1..151 | - | 151 | Protein_1 | conjugal transfer protein | - |
| EC3426_RS25745 () | 114..410 | - | 297 | WP_133963895.1 | Multifunctional conjugation protein TraI | Relaxase |
| EC3426_RS25750 () | 385..5379 | - | 4995 | Protein_3 | conjugative transfer relaxase/helicase TraI | - |
| EC3426_RS25755 () | 5379..7648 | - | 2270 | Protein_4 | type IV conjugative transfer system coupling protein TraD | - |
| EC3426_RS25760 () | 7699..8436 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| EC3426_RS25765 () | 8639..9352 | - | 714 | WP_000989336.1 | complement resistance protein TraT | - |
| EC3426_RS25770 () | 9418..9903 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| EC3426_RS25775 () | 9919..12741 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EC3426_RS25780 () | 12738..14111 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| EC3426_RS25785 () | 14098..14523 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| EC3426_RS25790 () | 14471..14818 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| EC3426_RS25795 () | 14748..15293 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EC3426_RS25800 () | 15280..15564 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EC3426_RS25805 () | 15683..16027 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| EC3426_RS25810 () | 16041..16784 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EC3426_RS25815 () | 16777..17034 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| EC3426_RS25820 () | 17061..18911 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EC3426_RS25825 () | 18908..19546 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EC3426_RS25830 () | 19555..19860 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| EC3426_RS25835 () | 19890..20882 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| EC3426_RS25840 () | 20879..21511 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| EC3426_RS25845 () | 21508..21894 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| EC3426_RS25850 () | 21891..24521 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| EC3426_RS25855 () | 24647..24994 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| EC3426_RS25860 () | 25022..25240 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| EC3426_RS25865 () | 25320..25796 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| EC3426_RS25870 () | 25789..26010 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| EC3426_RS25875 () | 26145..26660 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EC3426_RS25880 () | 26657..27025 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| EC3426_RS25885 () | 26964..27551 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| EC3426_RS25890 () | 27520..28971 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| EC3426_RS25895 () | 28971..29699 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| EC3426_RS25900 () | 29686..30252 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| EC3426_RS25905 () | 30274..30584 | - | 311 | Protein_34 | type IV conjugative transfer system protein TraL | - |
| EC3426_RS25910 () | 30599..30958 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| EC3426_RS25915 () | 30991..31218 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| EC3426_RS25920 () | 31355..32026 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| EC3426_RS25925 () | 32220..32603 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| EC3426_RS25935 () | 32926..33528 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
| EC3426_RS25940 () | 33825..34646 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| EC3426_RS25945 () | 34757..35053 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| EC3426_RS27165 () | 35353..35730 | + | 378 | Protein_42 | hypothetical protein | - |
| EC3426_RS25965 () | 35968..36126 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 36170..36394 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36170..36394 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36170..36394 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36170..36394 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| EC3426_RS27050 () | 36206..36385 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| EC3426_RS25970 () | 36406..37125 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| EC3426_RS25975 () | 37122..37556 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| EC3426_RS25980 () | 37625..39648 | - | 2024 | Protein_47 | ParB/RepB/Spo0J family partition protein | - |
| EC3426_RS25985 () | 39709..39942 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| EC3426_RS25990 () | 40000..40527 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| EC3426_RS26010 () | 41376..41939 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| EC3426_RS26015 () | 41986..43347 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| EC3426_RS26020 () | 43399..43629 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| EC3426_RS26030 () | 45029..46696 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| EC3426_RS26035 () | 47010..47201 | - | 192 | WP_039021874.1 | hypothetical protein | - |
| EC3426_RS26040 () | 47198..47620 | - | 423 | WP_000271684.1 | DUF1380 family protein | - |
| EC3426_RS26045 () | 47667..47969 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| EC3426_RS26055 () | 48452..49222 | - | 771 | WP_001006207.1 | hypothetical protein | - |
| EC3426_RS26060 () | 49267..49701 | - | 435 | WP_000274504.1 | DUF1380 family protein | - |
| EC3426_RS26065 () | 49714..49935 | - | 222 | WP_001104902.1 | hypothetical protein | - |
| EC3426_RS26070 () | 49936..50619 | - | 684 | WP_000085889.1 | DNA methylase | - |
| EC3426_RS26080 () | 50696..51004 | - | 309 | WP_039021875.1 | hypothetical protein | - |
| EC3426_RS26085 () | 51136..52098 | + | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| EC3426_RS26090 () | 52101..52451 | + | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| EC3426_RS26095 () | 52560..53022 | + | 463 | Protein_64 | hypothetical protein | - |
| EC3426_RS26100 () | 53247..54248 | - | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| EC3426_RS26105 () | 54551..57226 | + | 2676 | WP_015059139.1 | hypothetical protein | - |
| EC3426_RS27055 () | 57398..57565 | + | 168 | WP_001430249.1 | hypothetical protein | - |
| EC3426_RS26115 () | 57572..57741 | - | 170 | Protein_68 | resolvase | - |
| EC3426_RS26120 () | 57737..58621 | - | 885 | WP_001345827.1 | hypothetical protein | - |
| EC3426_RS26125 () | 58690..60204 | - | 1515 | Protein_70 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| EC3426_RS26130 () | 60270..60974 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC3426_RS26135 () | 61029..61895 | - | 867 | Protein_72 | IS91 family transposase ISAzo26 | Transposase |
| EC3426_RS26140 () | 62040..62537 | + | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| EC3426_RS26145 () | 62649..62939 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| EC3426_RS26150 () | 62945..63736 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| EC3426_RS26155 () | 63900..64247 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| EC3426_RS26160 () | 64241..65080 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| EC3426_RS26165 () | 65485..67026 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| EC3426_RS26175 () | 67339..68370 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| EC3426_RS26180 () | 68381..69019 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| EC3426_RS26185 () | 69024..69389 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| EC3426_RS26190 () | 69393..70205 | - | 813 | WP_133963898.1 | Metallo-beta-lactamase type 2 | ARG |
| EC3426_RS26195 () | 70306..70599 | - | 294 | Protein_83 | IS30 family transposase | - |
| EC3426_RS26200 () | 70764..71468 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EC3426_RS26205 () | 71534..72079 | + | 546 | Protein_85 | Tn3 family transposase TnpA_Tn3 | Transposase |
| EC3426_RS26210 () | 72115..72530 | - | 416 | Protein_86 | IS1 family transposase IS1R | Transposase |
| EC3426_RS26215 () | 72779..73180 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| EC3426_RS26220 () | 73113..73370 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| EC3426_RS26225 () | 73463..74116 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| EC3426_RS27060 () | 74214..74354 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| EC3426_RS26235 () | 75055..75912 | - | 858 | WP_060591631.1 | incFII family plasmid replication initiator RepA | - |
| EC3426_RS26240 () | 75905..75979 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EC3426_RS26250 () | 76217..76471 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| EC3426_RS26255 () | 76711..77301 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| EC3426_RS26260 () | 77339..77548 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| EC3426_RS26265 () | 77594..78055 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| EC3426_RS26270 () | 78300..78512 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| EC3426_RS26275 () | 78641..79201 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| EC3426_RS26280 () | 79304..80164 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| EC3426_RS26285 () | 80223..80969 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| EC3426_RS26290 () | 80989..86259 | - | 5271 | WP_106495462.1 | Multifunctional conjugation protein TraI | Relaxase |
| EC3426_RS26295 () | 86259..88529 | - | 2271 | WP_000009328.1 | type IV conjugative transfer system coupling protein TraD | - |
| EC3426_RS26300 () | 88580..89122 | - | 543 | WP_072129301.1 | hypothetical protein | - |
| EC3426_RS26305 () | 89519..90057 | - | 539 | Protein_104 | complement resistance protein TraT | - |
| EC3426_RS26310 () | 90298..90783 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| EC3426_RS26315 () | 90799..93621 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EC3426_RS26320 () | 93618..94986 | - | 1369 | Protein_107 | conjugal transfer protein TraH | - |
| EC3426_RS27065 () | 94973..95660 | - | 688 | Protein_108 | P-type conjugative transfer protein TrbJ | - |
| EC3426_RS26330 () | 95617..96158 | - | 542 | Protein_109 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EC3426_RS26335 () | 96145..96428 | - | 284 | Protein_110 | type-F conjugative transfer system pilin chaperone TraQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|