MGE detailed information
MGE type: Genomic_island MGE length: 20566 bp
Accession: NZ_LS992166 Location: 2451597..2472162 Organism: Escherichia coli isolate Escherichia coli str. TO6 Replicon: chromosome
Accession: NZ_LS992166 Location: 2451597..2472162 Organism: Escherichia coli isolate Escherichia coli str. TO6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO6_RS12160 () | 2446658..2448193 | - | 1536 | WP_001194860.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
| ECTO6_RS12165 () | 2448442..2449395 | + | 954 | WP_134091800.1 | transcriptional regulator LsrR | - |
| ECTO6_RS12170 () | 2449474..2451066 | + | 1593 | WP_000113108.1 | autoinducer-2 kinase | - |
| ECTO6_RS12175 () | 2451597..2453252 | + | 1656 | Protein_2356 | autotransporter barrel domain-containing lipoprotein | - |
| ECTO6_RS12180 () | 2453358..2454055 | + | 698 | Protein_2357 | IS1 family transposase | - |
| ECTO6_RS12185 () | 2454122..2455350 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| ECTO6_RS12190 () | 2455363..2459130 | + | 3768 | Protein_2359 | hypothetical protein | VF |
| ECTO6_RS12195 () | 2459353..2459619 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| ECTO6_RS12200 () | 2459619..2460941 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| ECTO6_RS12205 () | 2461253..2461461 | + | 209 | Protein_2362 | AraC family transcriptional regulator | - |
| ECTO6_RS12210 () | 2461716..2462942 | + | 1227 | Protein_2363 | Outer membrane usher protein FimD | VF |
| ECTO6_RS12215 () | 2462956..2463486 | + | 531 | WP_134091804.1 | Protein FimF | VF |
| ECTO6_RS12220 () | 2463499..2464002 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| ECTO6_RS12225 () | 2464061..2464975 | + | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| ECTO6_RS12230 () | 2465309..2467588 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| ECTO6_RS12235 () | 2467836..2468033 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| ECTO6_RS12240 () | 2468108..2468869 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| ECTO6_RS12245 () | 2469271..2470953 | + | 1683 | WP_001295684.1 | sulfatase | - |
| ECTO6_RS12250 () | 2471005..2472162 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| ECTO6_RS12255 () | 2472128..2472250 | - | 123 | WP_120795387.1 | protein YneP | - |
| ECTO6_RS12260 () | 2472453..2473444 | + | 992 | Protein_2373 | ABC transporter ATP-binding protein/permease | - |
| ECTO6_RS12265 () | 2473458..2474155 | - | 698 | Protein_2374 | IS1 family transposase | - |
| ECTO6_RS12270 () | 2474212..2474814 | + | 603 | Protein_2375 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|