MGE detailed information
MGE type: Conjugative plasmid MGE length: 82205 bp
Accession: NZ_LR898876 Location: 1..82205 Organism: Escherichia coli isolate MSB1_4I-sc-2280412 Replicon: plasmid 3
Accession: NZ_LR898876 Location: 1..82205 Organism: Escherichia coli isolate MSB1_4I-sc-2280412 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMX41_RS26800 () | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| JMX41_RS26805 () | 1772..2041 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| JMX41_RS26810 () | 2038..2319 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMX41_RS26815 () | 2365..3213 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| JMX41_RS26820 () | 3330..3812 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| JMX41_RS26825 () | 3847..4953 | - | 1107 | Protein_6 | IS5 family transposase IS903B | Transposase |
| JMX41_RS26830 () | 5405..6280 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| JMX41_RS26835 () | 6530..7792 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| JMX41_RS26840 () | 8136..9323 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| JMX41_RS26845 () | 9380..10141 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| JMX41_RS26850 () | 10141..11177 | - | 1037 | Protein_11 | Hemin transport system permease protein HmuU | VF |
| JMX41_RS26855 () | 11177..12175 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| JMX41_RS26860 () | 12325..12483 | - | 159 | Protein_13 | transposase | - |
| JMX41_RS26865 () | 12526..12768 | - | 243 | Protein_14 | helix-turn-helix domain-containing protein | - |
| JMX41_RS26870 () | 13026..13376 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| JMX41_RS26875 () | 13379..14341 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| JMX41_RS26880 () | 14488..14781 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| JMX41_RS26885 () | 14857..15540 | + | 684 | WP_012881149.1 | DNA methylase | - |
| JMX41_RS26890 () | 15541..15762 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| JMX41_RS26895 () | 15776..16210 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| JMX41_RS26900 () | 16261..17037 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| JMX41_RS26905 () | 17576..17878 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| JMX41_RS26910 () | 17925..18347 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| JMX41_RS26915 () | 18344..18535 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JMX41_RS26920 () | 19339..19479 | + | 141 | WP_012881142.1 | hypothetical protein | - |
| JMX41_RS26925 () | 19572..19802 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| JMX41_RS26930 () | 19854..21215 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| JMX41_RS26935 () | 21262..21825 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| JMX41_RS26940 () | 21977..22243 | + | 267 | WP_071828223.1 | hypothetical protein | - |
| JMX41_RS26945 () | 22716..23237 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| JMX41_RS26950 () | 23396..24643 | + | 1248 | WP_000414651.1 | site-specific integrase | - |
| JMX41_RS26955 () | 24630..26168 | + | 1539 | WP_001333349.1 | hypothetical protein | - |
| JMX41_RS26960 () | 26185..28218 | + | 2034 | WP_001572191.1 | hypothetical protein | - |
| JMX41_RS26965 () | 28211..28630 | + | 420 | WP_001062122.1 | hypothetical protein | - |
| JMX41_RS26970 () | 28706..33469 | + | 4764 | WP_001572194.1 | ATP-binding protein | - |
| JMX41_RS26975 () | 34008..34829 | - | 822 | WP_001272932.1 | hypothetical protein | - |
| JMX41_RS26980 () | 35194..35427 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| JMX41_RS26985 () | 35491..37449 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| JMX41_RS26990 () | 37504..37938 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| JMX41_RS26995 () | 37935..38654 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| JMX41_RS27000 () | 38651..38965 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 38914..39121 | + | 208 | NuclAT_0 | - | - |
| - () | 38914..39121 | + | 208 | NuclAT_0 | - | - |
| - () | 38914..39121 | + | 208 | NuclAT_0 | - | - |
| - () | 38914..39121 | + | 208 | NuclAT_0 | - | - |
| JMX41_RS27005 () | 39174..39335 | + | 162 | WP_012881135.1 | type I toxin-antitoxin system Hok family toxin | - |
| JMX41_RS27010 () | 39573..39842 | - | 270 | WP_001388591.1 | hypothetical protein | - |
| JMX41_RS27015 () | 40181..40504 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| JMX41_RS27020 () | 40563..40805 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| JMX41_RS27025 () | 41071..41337 | + | 267 | WP_071828223.1 | hypothetical protein | - |
| JMX41_RS27030 () | 41808..42104 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JMX41_RS27035 () | 42214..43035 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| JMX41_RS27040 () | 43331..43933 | - | 603 | WP_000243715.1 | hypothetical protein | VF |
| JMX41_RS27045 () | 44256..44639 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| JMX41_RS27050 () | 44833..45504 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| JMX41_RS27055 () | 45641..45868 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| JMX41_RS27060 () | 45901..46260 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| JMX41_RS27065 () | 46275..46586 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JMX41_RS27070 () | 46608..47174 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JMX41_RS27075 () | 47161..47889 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| JMX41_RS27080 () | 47889..49340 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| JMX41_RS27085 () | 49309..49896 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| JMX41_RS27090 () | 49835..50203 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| JMX41_RS27095 () | 50200..50715 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMX41_RS27100 () | 50850..51071 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JMX41_RS27105 () | 51064..51477 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| JMX41_RS27110 () | 51470..51943 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| JMX41_RS27115 () | 52023..52241 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| JMX41_RS27120 () | 52269..52616 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| JMX41_RS27125 () | 52742..55372 | + | 2631 | WP_012917677.1 | type IV secretion system protein TraC | - |
| JMX41_RS27130 () | 55369..55755 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JMX41_RS27135 () | 55752..56384 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| JMX41_RS27140 () | 56381..57373 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| JMX41_RS27145 () | 57403..57708 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| JMX41_RS27150 () | 57717..58355 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMX41_RS27155 () | 58352..60202 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMX41_RS27160 () | 60229..60486 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JMX41_RS27165 () | 60479..61222 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMX41_RS27170 () | 61236..61580 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| JMX41_RS27175 () | 61699..61983 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMX41_RS27180 () | 61970..62515 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMX41_RS27185 () | 62445..62792 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| JMX41_RS27190 () | 62740..63165 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| JMX41_RS27195 () | 63152..64525 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| JMX41_RS27200 () | 64522..67344 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMX41_RS27205 () | 67360..67845 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| JMX41_RS27210 () | 67894..68625 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| JMX41_RS27215 () | 68828..69565 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| JMX41_RS27220 () | 69616..71859 | + | 2244 | WP_025985153.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMX41_RS27225 () | 71859..77129 | + | 5271 | WP_201555664.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMX41_RS27230 () | 77149..77895 | + | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| JMX41_RS27235 () | 77954..78814 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| JMX41_RS27240 () | 78917..79477 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| JMX41_RS27245 () | 79606..79818 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| JMX41_RS27250 () | 80063..80524 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| JMX41_RS27255 () | 80570..80779 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JMX41_RS27260 () | 80817..81407 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| JMX41_RS27265 () | 81647..81901 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|