MGE detailed information
MGE type: Prophage MGE length: 82892 bp
Accession: NZ_LR890714 Location: 903444..986335 Organism: Escherichia coli isolate MSB1_6C-sc-2280315 Replicon: chromosome
Accession: NZ_LR890714 Location: 903444..986335 Organism: Escherichia coli isolate MSB1_6C-sc-2280315 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW19_RS04280 () | 899179..899829 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| JMW19_RS04285 () | 899852..900145 | + | 294 | Protein_842 | helix-turn-helix domain-containing protein | - |
| JMW19_RS04290 () | 900502..901047 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JMW19_RS04295 () | 901092..902243 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JMW19_RS04300 () | 902372..903427 | - | 1056 | WP_001564046.1 | propanediol utilization response regulator transcription factor GrpQ | - |
| JMW19_RS04305 () | 903444..904673 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JMW19_RS04310 () | 905322..905915 | - | 594 | Protein_847 | maturase | - |
| JMW19_RS04315 () | 905915..906284 | - | 370 | Protein_848 | reverse transcriptase/maturase | - |
| JMW19_RS04320 () | 906896..907801 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| JMW19_RS04325 () | 907938..908855 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JMW19_RS04330 () | 908964..911516 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JMW19_RS04335 () | 911565..912140 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JMW19_RS04340 () | 912151..912450 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JMW19_RS04345 () | 912474..913991 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| JMW19_RS04350 () | 914052..914837 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JMW19_RS04355 () | 914859..915140 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JMW19_RS04360 () | 915425..916621 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JMW19_RS04365 () | 916650..917147 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| JMW19_RS04370 () | 917175..917444 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| JMW19_RS04375 () | 917456..918160 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| JMW19_RS04380 () | 918165..918923 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| JMW19_RS04385 () | 918978..919664 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| JMW19_RS04390 () | 919804..920922 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| JMW19_RS04395 () | 921279..921779 | + | 501 | Protein_864 | DNA-binding protein | - |
| JMW19_RS04400 () | 921875..922108 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| JMW19_RS04405 () | 922161..922352 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| JMW19_RS04410 () | 923073..923333 | + | 261 | Protein_867 | IS3 family transposase ISLad1 | Transposase |
| JMW19_RS04415 () | 923476..925221 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| JMW19_RS04420 () | 925615..926055 | + | 441 | WP_001403216.1 | hypothetical protein | VF |
| JMW19_RS04425 () | 926096..926962 | + | 867 | Protein_870 | ImpA domain protein | - |
| JMW19_RS04430 () | 927079..927723 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| JMW19_RS04435 () | 927864..929096 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| JMW19_RS04440 () | 929081..929719 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| JMW19_RS04445 () | 929798..930067 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| JMW19_RS04450 () | 930088..930732 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| JMW19_RS04455 () | 930797..931120 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| JMW19_RS04460 () | 931168..931959 | - | 792 | Protein_877 | ATP-dependent helicase | - |
| JMW19_RS04465 () | 931954..932343 | + | 390 | Protein_878 | IS3 family transposase | - |
| JMW19_RS04470 () | 933016..934524 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JMW19_RS04475 () | 934614..935087 | + | 474 | Protein_880 | IS3 family transposase IS629 | Transposase |
| JMW19_RS04480 () | 935285..935542 | - | 258 | Protein_881 | IS3 family transposase IS911 | Transposase |
| JMW19_RS04485 () | 935612..935959 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| JMW19_RS04490 () | 936578..937271 | - | 694 | Protein_883 | IS1 family transposase IS1N | Transposase |
| JMW19_RS04495 () | 937524..938993 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| JMW19_RS04500 () | 939098..941467 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| JMW19_RS04505 () | 941542..943041 | + | 1500 | WP_021553054.1 | basic amino acid/polyamine antiporter | - |
| JMW19_RS04510 () | 943184..943881 | + | 698 | Protein_887 | IS1 family transposase IS1S | Transposase |
| JMW19_RS04515 () | 944348..944899 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| JMW19_RS04520 () | 945066..945857 | - | 792 | Protein_889 | IS3 family transposase | - |
| JMW19_RS04525 () | 945874..946571 | - | 698 | Protein_890 | IS1 family transposase IS1A | Transposase |
| JMW19_RS04530 () | 947101..948144 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| JMW19_RS04535 () | 948400..949665 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| JMW19_RS04540 () | 950129..950455 | - | 327 | WP_001522265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JMW19_RS04545 () | 950452..950715 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JMW19_RS04550 () | 950787..951653 | - | 867 | WP_023909479.1 | DUF4942 domain-containing protein | - |
| JMW19_RS04555 () | 951738..951935 | - | 198 | WP_001522268.1 | DUF957 domain-containing protein | - |
| JMW19_RS04560 () | 951947..952438 | - | 492 | WP_023909481.1 | hypothetical protein | - |
| JMW19_RS04565 () | 952435..952809 | - | 375 | WP_023909482.1 | TA system toxin CbtA family protein | Toxin Detail |
| JMW19_RS04570 () | 952856..953230 | - | 375 | WP_023909483.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| JMW19_RS04575 () | 953310..953531 | - | 222 | WP_023909484.1 | DUF987 domain-containing protein | - |
| JMW19_RS04580 () | 953583..954338 | - | 756 | WP_001522280.1 | IS21 family transposase ISEc10 | Transposase |
| JMW19_RS04585 () | 954335..955834 | - | 1500 | WP_059332257.1 | IS21 family transposase ISEc10 | Transposase |
| JMW19_RS04590 () | 956015..956491 | - | 477 | WP_171873879.1 | RadC family protein | - |
| JMW19_RS04595 () | 956507..956980 | - | 474 | WP_201523991.1 | antirestriction protein | - |
| JMW19_RS04600 () | 957075..957251 | - | 177 | WP_001522285.1 | hypothetical protein | - |
| JMW19_RS04605 () | 957251..958069 | - | 819 | WP_001522287.1 | DUF945 domain-containing protein | - |
| JMW19_RS04610 () | 958386..961508 | - | 3123 | WP_059332281.1 | autotransporter adhesin Ag43 | - |
| JMW19_RS04615 () | 961840..962712 | - | 873 | WP_023910520.1 | GTPase family protein | - |
| JMW19_RS04620 () | 962796..963950 | - | 1155 | WP_001522292.1 | hypothetical protein | - |
| JMW19_RS04625 () | 965938..966546 | - | 609 | WP_077634145.1 | hypothetical protein | - |
| JMW19_RS04630 () | 966634..966840 | - | 207 | WP_001095913.1 | AlpA family transcriptional regulator | - |
| JMW19_RS04635 () | 967810..968059 | + | 250 | Protein_912 | hypothetical protein | - |
| JMW19_RS04640 () | 968186..968380 | - | 195 | WP_000236756.1 | hypothetical protein | - |
| JMW19_RS04645 () | 968576..969145 | + | 570 | WP_000221478.1 | inovirus Gp2 family protein | - |
| JMW19_RS04650 () | 969313..969696 | + | 384 | WP_016234003.1 | hypothetical protein | - |
| JMW19_RS04655 () | 969693..970103 | + | 411 | WP_001522299.1 | hypothetical protein | - |
| JMW19_RS04660 () | 970535..970768 | + | 234 | WP_001522301.1 | AlpA family transcriptional regulator | - |
| JMW19_RS04665 () | 971046..971579 | + | 534 | WP_023910443.1 | hypothetical protein | - |
| JMW19_RS04670 () | 971581..972057 | - | 477 | WP_001522303.1 | ProQ/FinO family protein | - |
| JMW19_RS04675 () | 972193..972516 | + | 324 | WP_154673587.1 | hypothetical protein | - |
| JMW19_RS04680 () | 972621..972776 | + | 156 | Protein_921 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JMW19_RS04685 () | 972920..973546 | + | 627 | WP_001522305.1 | hypothetical protein | - |
| JMW19_RS04690 () | 973754..977359 | + | 3606 | WP_001522306.1 | hypothetical protein | - |
| JMW19_RS04695 () | 977628..978122 | - | 495 | WP_001522307.1 | Transcriptional repressor MprA | VF |
| JMW19_RS04700 () | 979309..979698 | + | 390 | WP_001522311.1 | hypothetical protein | - |
| JMW19_RS04705 () | 979974..981203 | + | 1230 | WP_031326665.1 | phosphoadenosine phosphosulfate reductase | - |
| JMW19_RS04710 () | 981188..981385 | + | 198 | Protein_927 | transcriptional regulator | - |
| JMW19_RS04715 () | 981487..982659 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| JMW19_RS04720 () | 982659..983456 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| JMW19_RS04725 () | 983515..983961 | + | 447 | Protein_930 | ParB N-terminal domain-containing protein | - |
| JMW19_RS04730 () | 984290..984532 | + | 243 | WP_001522318.1 | hypothetical protein | - |
| JMW19_RS04735 () | 984971..985228 | - | 258 | WP_023910665.1 | Dr hemagglutinin AFA-III operon transcriptional regulator AfaF | - |
| JMW19_RS04740 () | 986030..986335 | + | 306 | WP_001545784.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JMW19_RS04745 () | 986561..987358 | + | 798 | WP_001522323.1 | Dr fimbrial biogenesis chaperone DraB | - |
| JMW19_RS04750 () | 987398..989980 | + | 2583 | WP_001522324.1 | AfaC-I/III family usher protein | - |
| JMW19_RS04755 () | 989996..990439 | + | 444 | WP_001014486.1 | Dr fimbrial tip invasin DraD | - |
| JMW19_RS04760 () | 990818..990991 | + | 174 | WP_031326652.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|