MGE detailed information
MGE type: Genomic_island MGE length: 48933 bp
Accession: NZ_LR890693 Location: 4416836..4465768 Organism: Escherichia coli isolate MSB1_4E-sc-2280348 Replicon: chromosome
Accession: NZ_LR890693 Location: 4416836..4465768 Organism: Escherichia coli isolate MSB1_4E-sc-2280348 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW23_RS21470 () | 4413101..4414204 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JMW23_RS21475 () | 4414216..4415469 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JMW23_RS21485 () | 4415674..4415877 | - | 204 | Protein_4196 | integrase | - |
| JMW23_RS21490 () | 4416023..4416493 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| JMW23_RS21495 () | 4416471..4416656 | - | 186 | WP_101918754.1 | ash family protein | - |
| JMW23_RS21500 () | 4416836..4418083 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| JMW23_RS21505 () | 4418073..4419710 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| JMW23_RS21510 () | 4419704..4422802 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| JMW23_RS21515 () | 4423086..4423868 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| JMW23_RS21520 () | 4423855..4424775 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JMW23_RS21525 () | 4424940..4426259 | - | 1320 | Protein_4204 | hypothetical protein ; Integrase | Integrase |
| JMW23_RS21530 () | 4426486..4426644 | - | 159 | Protein_4205 | integrase | - |
| JMW23_RS21535 () | 4426693..4426878 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| JMW23_RS21540 () | 4427093..4427707 | + | 615 | WP_001019923.1 | YagU family protein | - |
| JMW23_RS21545 () | 4427781..4427944 | + | 164 | Protein_4208 | tail fiber assembly protein | - |
| JMW23_RS21550 () | 4427956..4428285 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| JMW23_RS21555 () | 4428592..4429302 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| JMW23_RS21560 () | 4429271..4430914 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| JMW23_RS21565 () | 4430904..4433429 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| JMW23_RS21570 () | 4433455..4434123 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| JMW23_RS21575 () | 4434180..4434767 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| JMW23_RS21580 () | 4434842..4435384 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| JMW23_RS21585 () | 4436208..4436398 | + | 191 | Protein_4216 | hypothetical protein | - |
| JMW23_RS21590 () | 4436468..4436608 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JMW23_RS21595 () | 4436608..4436871 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JMW23_RS21600 () | 4437236..4437337 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| JMW23_RS21605 () | 4437810..4438952 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| JMW23_RS21610 () | 4439125..4440045 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| JMW23_RS21615 () | 4440202..4441128 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| JMW23_RS21620 () | 4441328..4442221 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| JMW23_RS21625 () | 4442252..4443241 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| JMW23_RS21630 () | 4443268..4444119 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| JMW23_RS21635 () | 4444685..4448932 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| JMW23_RS21640 () | 4449057..4449914 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| JMW23_RS21645 () | 4450162..4451031 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| JMW23_RS21650 () | 4451191..4451784 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| JMW23_RS21655 () | 4451796..4452032 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| JMW23_RS21660 () | 4452141..4453466 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JMW23_RS21665 () | 4453693..4454547 | + | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| JMW23_RS21670 () | 4455073..4455792 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| JMW23_RS21675 () | 4455803..4457230 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| JMW23_RS21680 () | 4457223..4457918 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| JMW23_RS21685 () | 4458161..4458829 | - | 669 | WP_001005267.1 | membrane protein | - |
| JMW23_RS21690 () | 4459013..4460206 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JMW23_RS21695 () | 4460228..4460956 | - | 729 | Protein_4238 | outer membrane autotransporter HyxB | - |
| JMW23_RS21700 () | 4461013..4461710 | + | 698 | Protein_4239 | IS1 family transposase | - |
| JMW23_RS21705 () | 4461725..4462081 | - | 357 | Protein_4240 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JMW23_RS21710 () | 4462123..4462884 | - | 762 | WP_001213045.1 | protein HyxA | - |
| JMW23_RS21715 () | 4463038..4463832 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| JMW23_RS21720 () | 4464162..4464725 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| JMW23_RS21725 () | 4465810..4467480 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| JMW23_RS21730 () | 4467494..4468966 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| JMW23_RS21735 () | 4468980..4469567 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|