MGE detailed information
MGE type: Conjugative plasmid MGE length: 56756 bp
Accession: NZ_LR890605 Location: 1..56756 Organism: Escherichia coli isolate MSB1_8G-sc-2280388 Replicon: plasmid 3
Accession: NZ_LR890605 Location: 1..56756 Organism: Escherichia coli isolate MSB1_8G-sc-2280388 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW40_RS23790 () | 246..809 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| JMW40_RS23795 () | 855..2216 | - | 1362 | WP_000170665.1 | DUF3560 domain-containing protein | - |
| JMW40_RS23800 () | 2268..2498 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| JMW40_RS23805 () | 3539..3730 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| JMW40_RS23810 () | 3727..4149 | - | 423 | WP_000271722.1 | DUF1380 family protein | - |
| JMW40_RS23815 () | 4196..4498 | - | 303 | WP_072257078.1 | antirestriction protein | - |
| JMW40_RS23820 () | 5037..5807 | - | 771 | WP_001006238.1 | hypothetical protein | - |
| JMW40_RS23825 () | 5852..6286 | - | 435 | WP_000274447.1 | DUF1380 family protein | - |
| JMW40_RS23830 () | 6300..6521 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| JMW40_RS23835 () | 6522..7205 | - | 684 | WP_000085885.1 | DNA methylase | - |
| JMW40_RS23840 () | 7282..7593 | - | 312 | WP_171767207.1 | hypothetical protein | - |
| JMW40_RS23845 () | 7590..8492 | - | 903 | WP_001425207.1 | DUF1281 domain-containing protein | - |
| JMW40_RS23850 () | 9015..9977 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| JMW40_RS23855 () | 9980..10330 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| JMW40_RS23860 () | 10465..11097 | - | 633 | WP_001058006.1 | 3'-5' exonuclease | - |
| JMW40_RS23865 () | 11143..11424 | - | 282 | WP_000970000.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMW40_RS23870 () | 11421..11690 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| JMW40_RS23875 () | 12605..13462 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| JMW40_RS23880 () | 13455..13529 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JMW40_RS23885 () | 13767..14021 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| JMW40_RS23890 () | 14261..14851 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| JMW40_RS23895 () | 14889..15098 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| JMW40_RS23900 () | 15144..15605 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| JMW40_RS23905 () | 15850..16062 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| JMW40_RS23910 () | 16191..16751 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| JMW40_RS23915 () | 16854..17714 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| JMW40_RS23920 () | 17773..18519 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| JMW40_RS23925 () | 18539..23809 | - | 5271 | WP_201522901.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMW40_RS23930 () | 23809..25998 | - | 2190 | WP_017901267.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMW40_RS23935 () | 26049..26786 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| JMW40_RS23940 () | 26989..27720 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| JMW40_RS23945 () | 27769..28254 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| JMW40_RS23950 () | 28270..31092 | - | 2823 | WP_201525869.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMW40_RS23955 () | 31089..32462 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| JMW40_RS23960 () | 32449..32874 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| JMW40_RS23965 () | 32822..33169 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| JMW40_RS23970 () | 33099..33644 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMW40_RS23975 () | 33631..33915 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMW40_RS23980 () | 34034..34378 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| JMW40_RS23985 () | 34392..35135 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMW40_RS23990 () | 35128..35385 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| JMW40_RS23995 () | 35412..37262 | - | 1851 | WP_000826178.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMW40_RS24000 () | 37259..37681 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| JMW40_RS24005 () | 37707..38078 | - | 372 | WP_201525868.1 | hypothetical protein | - |
| JMW40_RS24010 () | 38075..38713 | - | 639 | WP_000087533.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMW40_RS24015 () | 38740..39153 | - | 414 | WP_201522899.1 | hypothetical protein | - |
| JMW40_RS24025 () | 40442..40594 | - | 153 | WP_201522903.1 | hypothetical protein | - |
| JMW40_RS24030 () | 40657..40965 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| JMW40_RS24035 () | 40992..41984 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| JMW40_RS24040 () | 41981..42613 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| JMW40_RS24045 () | 42610..42996 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JMW40_RS24050 () | 42993..45623 | - | 2631 | WP_000069771.1 | type IV secretion system protein TraC | - |
| JMW40_RS24055 () | 45749..46096 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| JMW40_RS24060 () | 46124..46342 | - | 219 | WP_001405917.1 | hypothetical protein | - |
| JMW40_RS24065 () | 46441..46917 | - | 477 | WP_000549577.1 | hypothetical protein | - |
| JMW40_RS24070 () | 46910..47131 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| JMW40_RS24075 () | 47266..47781 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMW40_RS24080 () | 47778..48146 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| JMW40_RS24085 () | 48085..48675 | - | 591 | WP_000002784.1 | conjugal transfer protein TraP | - |
| JMW40_RS24090 () | 48665..50092 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| JMW40_RS24095 () | 50092..50820 | - | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| JMW40_RS24100 () | 50807..51373 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| JMW40_RS24105 () | 51395..51706 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| JMW40_RS24110 () | 51721..52080 | - | 360 | WP_001098994.1 | type IV conjugative transfer system pilin TraA | - |
| JMW40_RS24115 () | 52114..52341 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| JMW40_RS24120 () | 52435..53121 | - | 687 | WP_000332499.1 | PAS domain-containing protein | - |
| JMW40_RS24125 () | 53315..53698 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| JMW40_RS24130 () | 54041..54631 | + | 591 | WP_148713293.1 | hypothetical protein | VF |
| JMW40_RS24135 () | 54928..55749 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| JMW40_RS24140 () | 55859..56155 | - | 297 | WP_001545326.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|