MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_LR890603 Location: 622838..634290 Organism: Escherichia coli isolate MSB1_8G-sc-2280388 Replicon: chromosome
Accession: NZ_LR890603 Location: 622838..634290 Organism: Escherichia coli isolate MSB1_8G-sc-2280388 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW40_RS02990 () | 617839..618273 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| JMW40_RS02995 () | 618291..619169 | - | 879 | WP_001298314.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JMW40_RS03000 () | 619159..619938 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| JMW40_RS03005 () | 619949..620422 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JMW40_RS03010 () | 620445..621725 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JMW40_RS03015 () | 621974..622783 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| JMW40_RS03020 () | 622838..623302 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JMW40_RS03025 () | 623302..623637 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JMW40_RS03030 () | 623786..625357 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| JMW40_RS03035 () | 625732..627066 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JMW40_RS03040 () | 627082..627852 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JMW40_RS03045 () | 627882..628772 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JMW40_RS03050 () | 628869..630014 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| JMW40_RS03060 () | 630814..632001 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| JMW40_RS03065 () | 632023..632562 | - | 540 | WP_000675749.1 | hypothetical protein | - |
| JMW40_RS03070 () | 632818..633162 | - | 345 | WP_001521376.1 | transcriptional activator TdcR | - |
| JMW40_RS03075 () | 633352..634290 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JMW40_RS03080 () | 634389..635378 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JMW40_RS03085 () | 635400..636731 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| JMW40_RS03090 () | 636757..637965 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|