MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_LR890299 Location: 2137625..2148383 Organism: Escherichia coli isolate MSB1_3B-sc-2280406 Replicon: chromosome
Accession: NZ_LR890299 Location: 2137625..2148383 Organism: Escherichia coli isolate MSB1_3B-sc-2280406 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JM188_RS10325 () | 2132971..2133753 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JM188_RS10330 () | 2134069..2137278 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JM188_RS10335 () | 2137439..2137579 | + | 141 | WP_001308408.1 | ash family protein | - |
| JM188_RS10340 () | 2137625..2138095 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JM188_RS10345 () | 2138092..2138194 | + | 103 | Protein_2027 | helix-turn-helix domain-containing protein | - |
| JM188_RS10350 () | 2138286..2138444 | + | 159 | Protein_2028 | integrase | - |
| JM188_RS10360 () | 2138649..2139902 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JM188_RS10365 () | 2139914..2141017 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JM188_RS10370 () | 2141305..2142360 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JM188_RS10375 () | 2142399..2142800 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JM188_RS10380 () | 2142858..2144102 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 2143518..2143598 | - | 81 | NuclAT_10 | - | - |
| - () | 2143518..2143598 | - | 81 | NuclAT_10 | - | - |
| - () | 2143518..2143598 | - | 81 | NuclAT_10 | - | - |
| - () | 2143518..2143598 | - | 81 | NuclAT_10 | - | - |
| JM188_RS10385 () | 2144194..2144652 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JM188_RS10390 () | 2144913..2146370 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JM188_RS10395 () | 2146427..2146779 | - | 353 | Protein_2036 | peptide chain release factor H | - |
| JM188_RS10400 () | 2146775..2146981 | - | 207 | Protein_2037 | RtcB family protein | - |
| JM188_RS10405 () | 2147227..2147679 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JM188_RS10410 () | 2147689..2148087 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JM188_RS10415 () | 2148090..2148383 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JM188_RS10420 () | 2148435..2149490 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JM188_RS10425 () | 2149561..2150346 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JM188_RS10430 () | 2150318..2152030 | + | 1713 | Protein_2043 | flagellar biosynthesis protein FlhA | - |
| JM188_RS10435 () | 2152135..2152413 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JM188_RS10440 () | 2152406..2152762 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|