MGE detailed information
MGE type: Genomic_island MGE length: 34444 bp
Accession: NZ_LR882493 Location: 2220169..2254612 Organism: Escherichia coli isolate 2016-17-292 Replicon: chromosome
Accession: NZ_LR882493 Location: 2220169..2254612 Organism: Escherichia coli isolate 2016-17-292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHO92_RS10850 () | 2216984..2218669 | - | 1686 | WP_000628542.1 | ABC transporter ATP-binding protein/permease | - |
| IHO92_RS10855 () | 2218872..2218994 | + | 123 | WP_122633168.1 | hypothetical protein | - |
| IHO92_RS10860 () | 2218960..2220117 | - | 1158 | WP_029403162.1 | anaerobic sulfatase maturase | - |
| IHO92_RS10865 () | 2220169..2221851 | - | 1683 | WP_001295684.1 | sulfatase | - |
| IHO92_RS10870 () | 2222253..2223014 | - | 762 | WP_000060479.1 | acid stress response transcriptional regulator YdeO | - |
| IHO92_RS10875 () | 2223089..2223286 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| IHO92_RS10880 () | 2223534..2225813 | - | 2280 | WP_000726689.1 | acid resistance putative oxidoreductase YdeP | - |
| IHO92_RS10885 () | 2226147..2227061 | - | 915 | WP_000520679.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| IHO92_RS10890 () | 2227121..2227624 | - | 504 | WP_000825458.1 | Protein FimG | VF |
| IHO92_RS10895 () | 2227637..2228167 | - | 531 | WP_000876784.1 | Protein FimF | VF |
| IHO92_RS10900 () | 2228181..2230832 | - | 2652 | WP_000125354.1 | Outer membrane usher protein FimD | VF |
| IHO92_RS10905 () | 2230874..2231584 | - | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| IHO92_RS10910 () | 2231945..2232508 | - | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| IHO92_RS10915 () | 2232940..2233148 | - | 209 | Protein_2136 | helix-turn-helix transcriptional regulator | - |
| IHO92_RS10920 () | 2233460..2234782 | - | 1323 | WP_001125463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| IHO92_RS10925 () | 2234782..2235048 | - | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| IHO92_RS10930 () | 2235257..2239171 | - | 3915 | WP_072216187.1 | hypothetical protein | VF |
| IHO92_RS10940 () | 2240460..2242013 | - | 1554 | WP_094316761.1 | extended Signal peptide of Type V secretion system family protein | - |
| IHO92_RS10945 () | 2242544..2244136 | - | 1593 | WP_000113125.1 | autoinducer-2 kinase | - |
| IHO92_RS10950 () | 2244215..2245168 | - | 954 | WP_000154340.1 | transcriptional regulator LsrR | - |
| IHO92_RS10955 () | 2245417..2246952 | + | 1536 | WP_001194882.1 | Autoinducer 2 import ATP-binding protein LsrA | VF |
| IHO92_RS10960 () | 2246946..2247974 | + | 1029 | WP_000911143.1 | autoinducer 2 ABC transporter permease LsrC | - |
| IHO92_RS10965 () | 2247974..2248579 | + | 606 | Protein_2146 | histidine kinase | - |
| IHO92_RS10970 () | 2248770..2250347 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| IHO92_RS10975 () | 2250657..2251217 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IHO92_RS10980 () | 2251221..2254187 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IHO92_RS10985 () | 2254220..2254612 | + | 393 | Protein_2150 | autoinducer 2 ABC transporter permease LsrD | - |
| IHO92_RS10990 () | 2254624..2255646 | + | 1023 | WP_000172470.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| IHO92_RS10995 () | 2255673..2256548 | + | 876 | WP_000774183.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| IHO92_RS11000 () | 2256572..2256862 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| IHO92_RS11005 () | 2256919..2257677 | + | 759 | WP_001286581.1 | trans-aconitate 2-methyltransferase | - |
| IHO92_RS11010 () | 2257681..2258595 | - | 915 | WP_000637082.1 | bestrophin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|