MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_LR778141 Location: 2963290..2975077 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Accession: NZ_LR778141 Location: 2963290..2975077 Organism: Escherichia coli isolate SC407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1C92_RS14490 () | 2959615..2960823 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| H1C92_RS14495 () | 2960849..2962180 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| H1C92_RS14500 () | 2962202..2963191 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| H1C92_RS14505 () | 2963290..2964228 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| H1C92_RS14510 () | 2964417..2964761 | + | 345 | WP_000145820.1 | transcriptional activator TdcR | - |
| H1C92_RS14515 () | 2965017..2965556 | + | 540 | WP_115425235.1 | hypothetical protein | - |
| H1C92_RS14520 () | 2965578..2966765 | + | 1188 | WP_000075593.1 | YhaC family protein | - |
| H1C92_RS14530 () | 2967901..2969046 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| H1C92_RS14535 () | 2969143..2970033 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| H1C92_RS14540 () | 2970063..2970833 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| H1C92_RS14545 () | 2970849..2972183 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| H1C92_RS14550 () | 2972558..2974129 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| H1C92_RS14555 () | 2974278..2974613 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| H1C92_RS14560 () | 2974613..2975077 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| H1C92_RS14565 () | 2975132..2975941 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| H1C92_RS14570 () | 2976190..2977470 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| H1C92_RS14575 () | 2977493..2977966 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| H1C92_RS14580 () | 2977977..2978756 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| H1C92_RS14585 () | 2978746..2979624 | + | 879 | WP_001315856.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| H1C92_RS14590 () | 2979642..2980076 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|