MGE detailed information
MGE type: Genomic_island MGE length: 77448 bp
Accession: NZ_HG994850 Location: 3814434..3891881 Organism: Escherichia coli isolate 127 Replicon: chromosome
Accession: NZ_HG994850 Location: 3814434..3891881 Organism: Escherichia coli isolate 127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLO83_RS18365 (3809591) | 3809591..3810178 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| LLO83_RS18370 (3810192) | 3810192..3811664 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| LLO83_RS18375 (3811678) | 3811678..3813348 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| LLO83_RS18380 (3814434) | 3814434..3814997 | + | 564 | WP_001335180.1 | ISKra4 family transposase ISCep1 | VF |
| LLO83_RS18385 (3815327) | 3815327..3816121 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| LLO83_RS18390 (3816275) | 3816275..3817036 | + | 762 | WP_001213042.1 | protein HyxA | - |
| LLO83_RS25045 (3817078) | 3817078..3819375 | + | 2298 | WP_000798055.1 | outer membrane autotransporter HyxB | - |
| LLO83_RS18405 (3819559) | 3819559..3820227 | + | 669 | WP_001005267.1 | protein YkgH | - |
| LLO83_RS18410 (3820470) | 3820470..3821165 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| LLO83_RS18415 (3821158) | 3821158..3822585 | - | 1428 | WP_000023923.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LLO83_RS18420 (3822596) | 3822596..3823315 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| LLO83_RS18430 (3824619) | 3824619..3825473 | - | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LLO83_RS18435 (3825700) | 3825700..3827025 | + | 1326 | WP_001046335.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LLO83_RS18440 (3827134) | 3827134..3827370 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LLO83_RS18445 (3827382) | 3827382..3827975 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| LLO83_RS18450 (3828135) | 3828135..3829004 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| LLO83_RS18455 (3829252) | 3829252..3830109 | + | 858 | WP_000620997.1 | Right origin-binding protein | VF |
| LLO83_RS18460 (3830234) | 3830234..3834481 | - | 4248 | WP_000092548.1 | hypothetical protein | VF |
| LLO83_RS18465 (3835047) | 3835047..3835895 | + | 849 | WP_227431588.1 | aldo/keto reductase | - |
| LLO83_RS18470 (3835922) | 3835922..3836911 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| LLO83_RS18475 (3836942) | 3836942..3837835 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator PgrR | VF |
| LLO83_RS18480 (3838035) | 3838035..3838961 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator PgrR | VF |
| LLO83_RS18485 (3839118) | 3839118..3840038 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| LLO83_RS18490 (3840210) | 3840210..3841352 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| LLO83_RS18495 (3841825) | 3841825..3841926 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| LLO83_RS18500 (3842291) | 3842291..3842554 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LLO83_RS18505 (3842554) | 3842554..3842694 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LLO83_RS18510 (3842729) | 3842729..3842954 | - | 226 | Protein_3628 | protein YkgL | - |
| LLO83_RS18515 (3843778) | 3843778..3844320 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| LLO83_RS18520 (3844411) | 3844411..3844983 | + | 573 | WP_042856856.1 | Common pilus major fimbrillin subunit EcpA | VF |
| LLO83_RS18525 (3845040) | 3845040..3845708 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| LLO83_RS18530 (3845734) | 3845734..3848259 | + | 2526 | WP_001131116.1 | putative outer membrane usher protein EcpC | VF |
| LLO83_RS18535 (3848249) | 3848249..3849892 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| LLO83_RS18540 (3849861) | 3849861..3850571 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| LLO83_RS18545 (3850878) | 3850878..3851207 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| LLO83_RS18550 (3851219) | 3851219..3851385 | - | 167 | Protein_3636 | tail fiber assembly protein | - |
| LLO83_RS18555 (3851456) | 3851456..3852070 | - | 615 | WP_001019923.1 | YagU family protein | - |
| LLO83_RS18560 (3852285) | 3852285..3852470 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| LLO83_RS18565 (3852519) | 3852519..3852677 | + | 159 | Protein_3639 | integrase | - |
| LLO83_RS18570 (3852894) | 3852894..3853587 | - | 694 | Protein_3640 | IS1 family transposase | - |
| LLO83_RS18575 (3854180) | 3854180..3858310 | + | 4131 | WP_001034003.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| LLO83_RS18580 (3858466) | 3858466..3858960 | + | 495 | WP_001059463.1 | Transcriptional repressor MprA | VF |
| LLO83_RS18585 (3859398) | 3859398..3859733 | - | 336 | Protein_3643 | Arm DNA-binding domain-containing protein | - |
| LLO83_RS18590 (3860099) | 3860099..3861418 | + | 1320 | WP_000144686.1 | Prophage integrase IntA ; Integrase | Integrase |
| LLO83_RS18595 (3861511) | 3861511..3862365 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| LLO83_RS18600 (3862450) | 3862450..3862647 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| LLO83_RS18605 (3862659) | 3862659..3863147 | - | 489 | WP_000761726.1 | DUF5983 family protein | - |
| LLO83_RS18610 (3863144) | 3863144..3863521 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| LLO83_RS18615 (3863611) | 3863611..3863979 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LLO83_RS18620 (3864142) | 3864142..3864363 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| LLO83_RS18625 (3864432) | 3864432..3864908 | - | 477 | WP_001186199.1 | RadC family protein | - |
| LLO83_RS18630 (3864924) | 3864924..3865409 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| LLO83_RS18635 (3865501) | 3865501..3866319 | - | 819 | WP_001234709.1 | DUF932 domain-containing protein | - |
| LLO83_RS18640 (3866646) | 3866646..3869768 | - | 3123 | WP_202847272.1 | autotransporter adhesin Ag43 | - |
| LLO83_RS18645 (3870102) | 3870102..3870974 | - | 873 | WP_021538680.1 | GTPase family protein | - |
| LLO83_RS18650 (3871305) | 3871305..3871487 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| LLO83_RS18655 (3871720) | 3871720..3871791 | - | 72 | Protein_3657 | IS66 family insertion sequence element accessory protein TnpB | - |
| LLO83_RS18660 (3871788) | 3871788..3872150 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| LLO83_RS18665 (3872537) | 3872537..3873847 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| LLO83_RS18670 (3873878) | 3873878..3876004 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| LLO83_RS18675 (3876208) | 3876208..3876918 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| LLO83_RS18680 (3877212) | 3877212..3878708 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| LLO83_RS18685 (3878755) | 3878755..3879642 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| LLO83_RS18690 (3880429) | 3880429..3880791 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| LLO83_RS18695 (3880788) | 3880788..3881135 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| LLO83_RS18700 (3881155) | 3881155..3881754 | + | 600 | Protein_3666 | IS66 family transposase IS679 | Transposase |
| LLO83_RS18705 (3881823) | 3881823..3882605 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LLO83_RS18710 (3882602) | 3882602..3883174 | - | 573 | Protein_3668 | IS21 family transposase IS100kyp | Transposase |
| LLO83_RS18715 (3883161) | 3883161..3883303 | - | 143 | Protein_3669 | IS110 family transposase | - |
| LLO83_RS18720 (3883364) | 3883364..3883549 | + | 186 | Protein_3670 | IS66 family transposase IS682 | Transposase |
| LLO83_RS18725 (3883656) | 3883656..3884855 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| LLO83_RS18730 (3885119) | 3885119..3885910 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| LLO83_RS18735 (3885929) | 3885929..3887899 | - | 1971 | WP_001445605.1 | Hemin receptor | VF |
| LLO83_RS18740 (3888245) | 3888245..3889608 | + | 1364 | Protein_3674 | IS4 family transposase ISEc13 | Transposase |
| LLO83_RS18750 (3890148) | 3890148..3890802 | - | 655 | Protein_3675 | hypothetical protein | - |
| LLO83_RS18755 (3891498) | 3891498..3891881 | + | 384 | Protein_3676 | IS4 family transposase IS4 | Transposase |
| LLO83_RS18760 (3891892) | 3891892..3892191 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| LLO83_RS18765 (3892729) | 3892729..3893844 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|