MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108296 bp
Accession: NZ_CP125858 Location: 1..108296 Organism: Vibrio parahaemolyticus strain G855 Replicon: plasmid p1
Accession: NZ_CP125858 Location: 1..108296 Organism: Vibrio parahaemolyticus strain G855 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMY43_RS24250 (QMY43_24250) | 1..1254 | + | 1254 | WP_023623178.1 | hypothetical protein | - |
| QMY43_RS24255 (QMY43_24255) | 1636..2261 | + | 626 | Protein_1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QMY43_RS24260 (QMY43_24260) | 2320..2544 | + | 225 | WP_025789152.1 | hypothetical protein | - |
| QMY43_RS24265 (QMY43_24265) | 2553..2759 | + | 207 | WP_023623181.1 | hypothetical protein | - |
| QMY43_RS24270 (QMY43_24270) | 2795..3127 | + | 333 | WP_159404405.1 | hypothetical protein | - |
| QMY43_RS24275 (QMY43_24275) | 4121..4291 | + | 171 | WP_224067182.1 | hypothetical protein | - |
| QMY43_RS24280 (QMY43_24280) | 4444..5445 | + | 1002 | Protein_6 | transposase | - |
| QMY43_RS24285 (QMY43_24285) | 5873..6394 | + | 522 | WP_025789149.1 | outer membrane beta-barrel protein | - |
| QMY43_RS24290 (QMY43_24290) | 6537..7520 | + | 984 | WP_017449262.1 | outer membrane beta-barrel protein | - |
| QMY43_RS24295 (QMY43_24295) | 7648..7989 | + | 342 | WP_228490421.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QMY43_RS24300 (QMY43_24300) | 8697..8870 | + | 174 | WP_017449264.1 | hypothetical protein | - |
| QMY43_RS24305 (QMY43_24305) | 9028..9447 | + | 420 | WP_129194448.1 | Spy/CpxP family protein refolding chaperone | - |
| QMY43_RS24310 (QMY43_24310) | 9938..10522 | - | 585 | Protein_12 | replication initiation protein | - |
| QMY43_RS24315 (QMY43_24315) | 10908..11171 | + | 264 | Protein_13 | IS6 family transposase ISSba18 | Transposase |
| QMY43_RS24320 (QMY43_24320) | 11172..11657 | + | 486 | WP_023624637.1 | recombinase family protein | - |
| QMY43_RS24325 (QMY43_24325) | 11758..12003 | + | 246 | WP_017449246.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| QMY43_RS24330 (QMY43_24330) | 12003..12320 | + | 318 | WP_023624638.1 | CcdB family protein | - |
| QMY43_RS24335 (QMY43_24335) | 12336..12548 | - | 213 | WP_127914006.1 | hypothetical protein | - |
| QMY43_RS24340 (QMY43_24340) | 12937..14055 | - | 1119 | WP_159357255.1 | hypothetical protein | VF |
| QMY43_RS24345 (QMY43_24345) | 14415..14591 | - | 177 | WP_023624642.1 | hypothetical protein | - |
| QMY43_RS24350 (QMY43_24350) | 14806..14933 | - | 128 | Protein_20 | IS91 family transposase | - |
| QMY43_RS24355 (QMY43_24355) | 14969..15268 | - | 300 | WP_023624643.1 | hypothetical protein | - |
| QMY43_RS24360 (QMY43_24360) | 15344..15592 | - | 249 | WP_025789522.1 | helix-turn-helix domain-containing protein | - |
| QMY43_RS24365 (QMY43_24365) | 15674..16606 | - | 933 | WP_023624644.1 | OmpA family protein | - |
| QMY43_RS24370 (QMY43_24370) | 17393..17827 | + | 435 | WP_023624645.1 | IS630 family transposase ISSod10 | Transposase |
| QMY43_RS24375 (QMY43_24375) | 18288..18920 | - | 633 | WP_023624646.1 | Ig-like domain-containing protein | - |
| QMY43_RS24380 (QMY43_24380) | 18886..19890 | - | 1005 | WP_158501040.1 | Ig-like domain-containing protein | - |
| QMY43_RS24385 (QMY43_24385) | 20451..20825 | - | 375 | WP_042761155.1 | hypothetical protein | - |
| QMY43_RS24390 (QMY43_24390) | 21135..21356 | + | 222 | WP_023624649.1 | hypothetical protein | - |
| QMY43_RS24395 (QMY43_24395) | 21959..22342 | + | 384 | Protein_29 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| QMY43_RS24400 (QMY43_24400) | 22337..22939 | - | 603 | WP_224067207.1 | site-specific integrase | - |
| QMY43_RS24405 (QMY43_24405) | 23513..23743 | + | 231 | WP_017449238.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| QMY43_RS24410 (QMY43_24410) | 23740..24081 | + | 342 | WP_023624650.1 | endoribonuclease MazF | Toxin Detail |
| QMY43_RS24415 (QMY43_24415) | 24384..24959 | - | 576 | WP_017449240.1 | hypothetical protein | - |
| QMY43_RS24420 (QMY43_24420) | 24959..25690 | - | 732 | WP_025789518.1 | AHH domain-containing protein | - |
| QMY43_RS24425 (QMY43_24425) | 25951..26042 | - | 92 | Protein_35 | DUF3265 domain-containing protein | - |
| QMY43_RS24430 (QMY43_24430) | 26933..28021 | - | 1089 | WP_086370877.1 | replication initiation protein | - |
| QMY43_RS24435 (QMY43_24435) | 28355..28993 | - | 639 | Protein_37 | IS5 family transposase ISVpa3 | Transposase |
| QMY43_RS24440 (QMY43_24440) | 29361..29999 | + | 639 | WP_025789491.1 | hypothetical protein | - |
| QMY43_RS24445 (QMY43_24445) | 30077..30634 | + | 558 | WP_025789492.1 | hypothetical protein | - |
| QMY43_RS24450 (QMY43_24450) | 30631..33366 | + | 2736 | WP_025789493.1 | TcfC E-set like domain-containing protein | - |
| QMY43_RS24455 (QMY43_24455) | 33372..34121 | + | 750 | WP_025789494.1 | hypothetical protein | - |
| QMY43_RS24460 (QMY43_24460) | 34121..35176 | + | 1056 | WP_025499517.1 | hypothetical protein | - |
| QMY43_RS24465 (QMY43_24465) | 35176..36096 | + | 921 | WP_025789495.1 | OmpA family protein | - |
| QMY43_RS24470 (QMY43_24470) | 36100..38877 | + | 2778 | WP_269666180.1 | hypothetical protein | - |
| QMY43_RS24475 (QMY43_24475) | 39134..39784 | + | 651 | WP_131162787.1 | hypothetical protein | - |
| QMY43_RS24480 (QMY43_24480) | 39856..40215 | + | 360 | WP_127914002.1 | hypothetical protein | - |
| QMY43_RS24485 (QMY43_24485) | 40690..40893 | - | 204 | Protein_47 | hypothetical protein | VF |
| QMY43_RS24490 (QMY43_24490) | 41036..41179 | - | 144 | WP_156216758.1 | hypothetical protein | - |
| QMY43_RS24500 (QMY43_24500) | 42798..43895 | + | 1098 | WP_023624924.1 | Outer membrane protein A | VF |
| QMY43_RS24505 (QMY43_24505) | 43913..48799 | + | 4887 | WP_159404413.1 | Ig-like domain-containing protein | - |
| QMY43_RS24510 (QMY43_24510) | 49437..49919 | - | 483 | Protein_52 | DDE-type integrase/transposase/recombinase | - |
| QMY43_RS24515 (QMY43_24515) | 50146..50727 | + | 582 | WP_025792420.1 | transglutaminase-like cysteine peptidase | - |
| QMY43_RS24520 (QMY43_24520) | 51903..52283 | + | 381 | Protein_54 | transposase | - |
| QMY43_RS24525 (QMY43_24525) | 52637..54556 | + | 1920 | WP_025792422.1 | metallophosphoesterase | - |
| QMY43_RS24530 (QMY43_24530) | 54766..55056 | + | 291 | Protein_56 | transposase | - |
| QMY43_RS24535 (QMY43_24535) | 55050..56120 | - | 1071 | WP_025792424.1 | ParB family protein | - |
| QMY43_RS24540 (QMY43_24540) | 56120..57319 | - | 1200 | WP_017449270.1 | ParA family protein | - |
| QMY43_RS24545 (QMY43_24545) | 58040..58225 | + | 186 | Protein_59 | helix-turn-helix domain-containing protein | - |
| QMY43_RS24550 (QMY43_24550) | 58366..58494 | + | 129 | WP_017449273.1 | hypothetical protein | - |
| QMY43_RS24555 (QMY43_24555) | 59731..60630 | - | 900 | WP_017449275.1 | hypothetical protein | - |
| QMY43_RS24560 (QMY43_24560) | 61031..61693 | - | 663 | WP_017449276.1 | XRE family transcriptional regulator | - |
| QMY43_RS24565 (QMY43_24565) | 62014..62310 | - | 297 | WP_149151356.1 | hypothetical protein | - |
| QMY43_RS24570 (QMY43_24570) | 62388..62540 | + | 153 | WP_032072624.1 | hypothetical protein | - |
| QMY43_RS24575 (QMY43_24575) | 62591..62920 | + | 330 | WP_044140172.1 | TrbC/VirB2 family protein | - |
| QMY43_RS24580 (QMY43_24580) | 62931..63245 | + | 315 | WP_149151357.1 | conjugal transfer protein TrbD | - |
| QMY43_RS24585 (QMY43_24585) | 63286..65700 | + | 2415 | WP_149151358.1 | DUF87 domain-containing protein | - |
| QMY43_RS24590 (QMY43_24590) | 65697..66455 | + | 759 | WP_149151359.1 | P-type conjugative transfer protein TrbJ | - |
| QMY43_RS24595 (QMY43_24595) | 66466..67413 | + | 948 | WP_029864803.1 | Type IV secretion system protein VirB11 | VF |
| QMY43_RS24600 (QMY43_24600) | 67410..68723 | + | 1314 | WP_156216769.1 | P-type conjugative transfer protein TrbL | - |
| QMY43_RS24605 (QMY43_24605) | 68734..68931 | + | 198 | WP_023623311.1 | hypothetical protein | - |
| QMY43_RS24610 (QMY43_24610) | 68941..69615 | + | 675 | WP_078231497.1 | VirB8/TrbF family protein | - |
| QMY43_RS24615 (QMY43_24615) | 69624..70496 | + | 873 | WP_156216767.1 | P-type conjugative transfer protein TrbG | - |
| QMY43_RS24620 (QMY43_24620) | 70496..70918 | + | 423 | WP_017449288.1 | hypothetical protein | - |
| QMY43_RS24625 (QMY43_24625) | 70911..72167 | + | 1257 | WP_156216765.1 | hypothetical protein | VF |
| QMY43_RS24630 (QMY43_24630) | 72453..73052 | + | 600 | WP_283278701.1 | hypothetical protein | - |
| QMY43_RS24635 (QMY43_24635) | 73052..74554 | + | 1503 | WP_236579098.1 | Type 3 secretion system secretin | VF |
| QMY43_RS24640 (QMY43_24640) | 74554..75684 | + | 1131 | WP_025789145.1 | hypothetical protein | - |
| QMY43_RS24645 (QMY43_24645) | 75681..76325 | + | 645 | WP_025789146.1 | hypothetical protein | - |
| QMY43_RS24650 (QMY43_24650) | 76322..77944 | + | 1623 | WP_283278702.1 | ATPase, T2SS/T4P/T4SS family | - |
| QMY43_RS24655 (QMY43_24655) | 77941..78945 | + | 1005 | WP_159404412.1 | hypothetical protein | - |
| QMY43_RS24660 (QMY43_24660) | 78959..79543 | + | 585 | WP_025499476.1 | hypothetical protein | VF |
| QMY43_RS24665 (QMY43_24665) | 79543..80070 | + | 528 | WP_140062535.1 | hypothetical protein | - |
| QMY43_RS24670 (QMY43_24670) | 80070..81026 | + | 957 | WP_283278704.1 | type II secretion system protein | - |
| QMY43_RS24675 (QMY43_24675) | 81102..81458 | + | 357 | WP_269666174.1 | hypothetical protein | - |
| QMY43_RS24680 (QMY43_24680) | 81568..82623 | + | 1056 | WP_159404415.1 | trypsin-like serine protease | - |
| QMY43_RS24685 (QMY43_24685) | 82767..83033 | + | 267 | WP_050914797.1 | helix-turn-helix domain-containing protein | - |
| QMY43_RS24690 (QMY43_24690) | 83196..83573 | + | 378 | WP_023623402.1 | hypothetical protein | - |
| QMY43_RS24695 (QMY43_24695) | 83590..84096 | + | 507 | WP_050914798.1 | conjugative transfer signal peptidase TraF | - |
| QMY43_RS24700 (QMY43_24700) | 84110..84625 | + | 516 | WP_050914799.1 | Type IV secretion system protein virB1 | VF |
| QMY43_RS24705 (QMY43_24705) | 84690..85271 | + | 582 | WP_050914800.1 | hypothetical protein | - |
| QMY43_RS24710 (QMY43_24710) | 85282..86196 | + | 915 | WP_023623161.1 | hypothetical protein | - |
| QMY43_RS24715 (QMY43_24715) | 86335..86616 | + | 282 | WP_023623162.1 | hypothetical protein | - |
| QMY43_RS24720 (QMY43_24720) | 86613..87314 | + | 702 | WP_140300726.1 | hypothetical protein | - |
| QMY43_RS24725 (QMY43_24725) | 87311..87697 | + | 387 | WP_050914803.1 | hypothetical protein | - |
| QMY43_RS24730 (QMY43_24730) | 88104..88511 | + | 408 | WP_086598014.1 | H-NS family nucleoid-associated regulatory protein | - |
| QMY43_RS24735 (QMY43_24735) | 89505..91466 | + | 1962 | WP_122045222.1 | TraM recognition domain-containing protein | - |
| QMY43_RS24740 (QMY43_24740) | 91566..92036 | + | 471 | WP_236579095.1 | DUF1845 domain-containing protein | - |
| QMY43_RS24745 (QMY43_24745) | 92033..92773 | + | 741 | WP_025789168.1 | hypothetical protein | Relaxase |
| QMY43_RS24750 (QMY43_24750) | 92839..95052 | + | 2214 | WP_269666175.1 | DNA topoisomerase | - |
| QMY43_RS24755 (QMY43_24755) | 95094..95276 | + | 183 | WP_224723966.1 | hypothetical protein | - |
| QMY43_RS24760 (QMY43_24760) | 96148..96447 | + | 300 | WP_029559533.1 | hypothetical protein | - |
| QMY43_RS24765 (QMY43_24765) | 96480..96680 | + | 201 | WP_159404409.1 | hypothetical protein | - |
| QMY43_RS24770 (QMY43_24770) | 96732..96995 | - | 264 | WP_031500117.1 | hypothetical protein | - |
| QMY43_RS24775 (QMY43_24775) | 97107..97511 | - | 405 | WP_031500119.1 | hypothetical protein | - |
| QMY43_RS24780 (QMY43_24780) | 97616..98029 | - | 414 | WP_159404408.1 | antirestriction protein | - |
| QMY43_RS24785 (QMY43_24785) | 98190..98531 | - | 342 | WP_071653131.1 | hypothetical protein | - |
| QMY43_RS24790 (QMY43_24790) | 98601..99506 | - | 906 | WP_078231471.1 | zincin-like metallopeptidase domain-containing protein | - |
| QMY43_RS24795 (QMY43_24795) | 99662..99949 | - | 288 | WP_023625127.1 | hypothetical protein | - |
| QMY43_RS24800 (QMY43_24800) | 100389..100973 | + | 585 | WP_023625126.1 | DUF2913 family protein | - |
| QMY43_RS24805 (QMY43_24805) | 101056..101190 | + | 135 | WP_257877424.1 | hypothetical protein | - |
| QMY43_RS24810 (QMY43_24810) | 102684..105305 | - | 2622 | WP_159404407.1 | toll/interleukin-1 receptor domain-containing protein | - |
| QMY43_RS24815 (QMY43_24815) | 105307..105897 | - | 591 | WP_159404406.1 | hypothetical protein | - |
| QMY43_RS24820 (QMY43_24820) | 106268..106870 | + | 603 | WP_023623175.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| QMY43_RS24825 (QMY43_24825) | 107008..107394 | + | 387 | WP_025792428.1 | hypothetical protein | - |
| QMY43_RS24830 (QMY43_24830) | 107794..107937 | + | 144 | WP_023623177.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|