MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124515 Location: 4523844..4564767 Organism: Escherichia coli strain AVS0282 Replicon: chromosome
Accession: NZ_CP124515 Location: 4523844..4564767 Organism: Escherichia coli strain AVS0282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP70_RS22055 (4519276) | 4519276..4520094 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP70_RS22060 (4520117) | 4520117..4520695 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP70_RS22070 (4522673) | 4522673..4523851 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP70_RS22075 (4523844) | 4523844..4525295 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP70_RS22080 (4525370) | 4525370..4525503 | - | 134 | Protein_4334 | phosphate-starvation-inducible protein PsiE | - |
| QJP70_RS22085 (4525505) | 4525505..4525621 | - | 117 | Protein_4335 | phosphoporin PhoE | - |
| QJP70_RS22090 (4525919) | 4525919..4526553 | + | 635 | Protein_4336 | IS3 family transposase IS2 | Transposase |
| QJP70_RS22095 (4526609) | 4526609..4527487 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP70_RS22100 (4527815) | 4527815..4528546 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP70_RS22105 (4530029) | 4530029..4531252 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP70_RS22110 (4531353) | 4531353..4532237 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP70_RS22115 (4532440) | 4532440..4533120 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP70_RS22120 (4533268) | 4533268..4533945 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP70_RS22125 (4533951) | 4533951..4534184 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP70_RS22130 (4534274) | 4534274..4535092 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP70_RS22135 (4535183) | 4535183..4535668 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP70_RS22140 (4535683) | 4535683..4536159 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP70_RS22145 (4536228) | 4536228..4536449 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP70_RS22150 (4536528) | 4536528..4536896 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP70_RS22155 (4536986) | 4536986..4537363 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP70_RS22160 (4537360) | 4537360..4537848 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP70_RS22165 (4537860) | 4537860..4538057 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP70_RS22170 (4538142) | 4538142..4538996 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP70_RS22175 (4539314) | 4539314..4539473 | + | 160 | Protein_4353 | integrase | - |
| QJP70_RS22180 (4539733) | 4539733..4541271 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP70_RS22185 (4541637) | 4541637..4542971 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP70_RS22190 (4543051) | 4543051..4545198 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP70_RS22195 (4545257) | 4545257..4546714 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP70_RS22200 (4546951) | 4546951..4548468 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP70_RS22205 (4548587) | 4548587..4548760 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP70_RS22210 (4548788) | 4548788..4549084 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP70_RS22215 (4549312) | 4549312..4549584 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP70_RS22220 (4549798) | 4549798..4553727 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP70_RS22225 (4554882) | 4554882..4555712 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP70_RS22230 (4556610) | 4556610..4560461 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP70_RS22235 (4560867) | 4560867..4561436 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP70_RS22240 (4561498) | 4561498..4562202 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP70_RS22245 (4562230) | 4562230..4564767 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP70_RS22250 (4564877) | 4564877..4565149 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP70_RS22255 (4565161) | 4565161..4565391 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP70_RS22260 (4565572) | 4565572..4567203 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP70_RS22265 (4567200) | 4567200..4567919 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|