MGE detailed information
MGE type: Genomic_island MGE length: 16181 bp
Accession: NZ_CP124495 Location: 4393300..4409480 Organism: Escherichia coli strain AVS0662 Replicon: chromosome
Accession: NZ_CP124495 Location: 4393300..4409480 Organism: Escherichia coli strain AVS0662 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP57_RS21545 (4389970) | 4389970..4391427 | + | 1458 | WP_001610404.1 | dipeptide/tripeptide permease DtpC | - |
| QJP57_RS21550 (4391664) | 4391664..4393181 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP57_RS21555 (4393300) | 4393300..4393473 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP57_RS21560 (4393501) | 4393501..4393797 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP57_RS21565 (4394025) | 4394025..4394297 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP57_RS21570 (4394511) | 4394511..4398440 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP57_RS21575 (4399595) | 4399595..4400425 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP57_RS21580 (4401323) | 4401323..4405174 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP57_RS21585 (4405580) | 4405580..4406149 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP57_RS21590 (4406211) | 4406211..4406915 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP57_RS21595 (4406943) | 4406943..4409480 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP57_RS21600 (4409590) | 4409590..4409862 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP57_RS21605 (4409874) | 4409874..4410104 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP57_RS21610 (4410285) | 4410285..4411916 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP57_RS21615 (4411913) | 4411913..4412632 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|