MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124467 Location: 4304505..4329447 Organism: Escherichia coli strain AVS0747 Replicon: chromosome
Accession: NZ_CP124467 Location: 4304505..4329447 Organism: Escherichia coli strain AVS0747 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB08_RS20980 (4299666) | 4299666..4300967 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QJB08_RS20985 (4301083) | 4301083..4301421 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJB08_RS20990 (4301397) | 4301397..4303094 | + | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJB08_RS20995 (4303131) | 4303131..4303706 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJB08_RS21005 (4304086) | 4304086..4304245 | + | 160 | Protein_4126 | integrase | - |
| QJB08_RS21010 (4304505) | 4304505..4306043 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB08_RS21015 (4306409) | 4306409..4307743 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB08_RS21020 (4307823) | 4307823..4309970 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB08_RS21025 (4310029) | 4310029..4311486 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB08_RS21030 (4311723) | 4311723..4313240 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB08_RS21035 (4313359) | 4313359..4313532 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB08_RS21040 (4313560) | 4313560..4313856 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB08_RS21045 (4314084) | 4314084..4314356 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJB08_RS21050 (4314570) | 4314570..4318499 | - | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJB08_RS21055 (4319655) | 4319655..4320485 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB08_RS21060 (4321383) | 4321383..4325195 | - | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJB08_RS21065 (4325596) | 4325596..4326120 | + | 525 | WP_000491818.1 | hypothetical protein | - |
| QJB08_RS21070 (4326185) | 4326185..4326877 | + | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJB08_RS21075 (4326910) | 4326910..4329447 | + | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJB08_RS21080 (4329557) | 4329557..4329829 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB08_RS21085 (4329841) | 4329841..4330071 | - | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB08_RS21090 (4330252) | 4330252..4331883 | + | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJB08_RS21095 (4331880) | 4331880..4332599 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|