MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124442 Location: 3367104..3392045 Organism: Escherichia coli strain AVS0196 Replicon: chromosome
Accession: NZ_CP124442 Location: 3367104..3392045 Organism: Escherichia coli strain AVS0196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP94_RS16570 (3363952) | 3363952..3364671 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP94_RS16575 (3364668) | 3364668..3366299 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP94_RS16580 (3366480) | 3366480..3366710 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP94_RS16585 (3366722) | 3366722..3366994 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP94_RS16590 (3367104) | 3367104..3369641 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| QJP94_RS16595 (3369674) | 3369674..3370366 | - | 693 | WP_000760483.1 | hypothetical protein | VF |
| QJP94_RS16600 (3370431) | 3370431..3370955 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP94_RS16605 (3371356) | 3371356..3375168 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| QJP94_RS16610 (3376066) | 3376066..3376896 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP94_RS16615 (3378052) | 3378052..3381981 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| QJP94_RS16620 (3382195) | 3382195..3382467 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP94_RS16625 (3382695) | 3382695..3382991 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP94_RS16630 (3383019) | 3383019..3383192 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP94_RS16635 (3383311) | 3383311..3384828 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP94_RS16640 (3385065) | 3385065..3386522 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP94_RS16645 (3386581) | 3386581..3388728 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP94_RS16650 (3388808) | 3388808..3390142 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP94_RS16655 (3390508) | 3390508..3392045 | - | 1538 | Protein_3255 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP94_RS16660 (3392305) | 3392305..3392464 | - | 160 | Protein_3256 | integrase | - |
| QJP94_RS16670 (3392844) | 3392844..3393419 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP94_RS16675 (3393456) | 3393456..3395153 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP94_RS16680 (3395129) | 3395129..3395467 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP94_RS16685 (3395583) | 3395583..3396884 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|