MGE detailed information
MGE type: Prophage MGE length: 66032 bp
Accession: NZ_CP124436 Location: 501406..567437 Organism: Escherichia coli strain AVS0790 Replicon: chromosome
Accession: NZ_CP124436 Location: 501406..567437 Organism: Escherichia coli strain AVS0790 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP66_RS02485 () | 497262..498062 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| QJP66_RS02490 () | 498075..498926 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QJP66_RS02495 () | 498981..499439 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| QJP66_RS02500 () | 499868..500434 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| QJP66_RS02505 () | 500431..501240 | - | 810 | WP_000010096.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QJP66_RS02510 () | 501406..501615 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QJP66_RS02515 () | 501628..501771 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QJP66_RS02520 () | 502441..502728 | - | 288 | WP_001006866.1 | YebO family protein | - |
| QJP66_RS02525 () | 502803..502946 | - | 144 | WP_000714544.1 | PhoP/PhoQ regulator MgrB | - |
| QJP66_RS02530 () | 503105..503344 | + | 240 | WP_001211011.1 | YobH family protein | - |
| QJP66_RS02535 () | 503488..504279 | - | 792 | WP_001262185.1 | DNA-binding transcriptional regulator KdgR | - |
| QJP66_RS02540 () | 504456..505829 | + | 1374 | WP_001296135.1 | MFS transporter | - |
| QJP66_RS02545 () | 505875..506756 | - | 882 | WP_000984517.1 | protease HtpX | - |
| QJP66_RS02550 () | 506948..508996 | - | 2049 | WP_001055794.1 | carboxy terminal-processing peptidase | - |
| QJP66_RS02555 () | 509016..509714 | - | 699 | WP_000431388.1 | RNA chaperone ProQ | - |
| QJP66_RS02560 () | 509811..510308 | - | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| QJP66_RS02565 () | 510438..511721 | + | 1284 | WP_001531756.1 | membrane integrity lipid transport subunit YebS | - |
| QJP66_RS02570 () | 511690..514323 | + | 2634 | WP_001298452.1 | hypothetical protein | VF |
| QJP66_RS02575 () | 514403..515842 | + | 1440 | WP_001296139.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QJP66_RS02580 () | 515959..516195 | + | 237 | WP_001295499.1 | YebV family protein | - |
| QJP66_RS02585 () | 516300..516491 | + | 192 | WP_001296140.1 | YebW family protein | - |
| QJP66_RS02590 () | 516492..517148 | - | 657 | WP_000812745.1 | protein-serine/threonine phosphatase | - |
| QJP66_RS02595 () | 517613..518167 | - | 555 | WP_000904983.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QJP66_RS02600 () | 518197..518700 | + | 504 | WP_021527583.1 | phage tail protein | - |
| QJP66_RS02605 () | 518700..519302 | + | 603 | WP_021527584.1 | tail fiber assembly protein | - |
| QJP66_RS02610 () | 519274..519717 | - | 444 | WP_000978829.1 | tail fiber assembly protein | - |
| QJP66_RS02615 () | 519717..520388 | - | 672 | WP_021527585.1 | hypothetical protein | - |
| QJP66_RS02620 () | 520388..521068 | - | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| QJP66_RS02625 () | 521065..522264 | - | 1200 | WP_021527586.1 | baseplate J/gp47 family protein | - |
| QJP66_RS02630 () | 522264..522617 | - | 354 | WP_001270632.1 | hypothetical protein | - |
| QJP66_RS02635 () | 522617..523369 | - | 753 | WP_021527587.1 | Gp138 family membrane-puncturing spike protein | - |
| QJP66_RS02640 () | 524144..524497 | - | 354 | WP_021527589.1 | hypothetical protein | - |
| QJP66_RS02645 () | 524497..525564 | - | 1068 | WP_021527590.1 | hypothetical protein | - |
| QJP66_RS02650 () | 525567..525869 | - | 303 | WP_000155119.1 | hypothetical protein | - |
| QJP66_RS02655 () | 525869..526456 | - | 588 | WP_021527591.1 | hypothetical protein | - |
| QJP66_RS02660 () | 526456..528444 | - | 1989 | WP_021527592.1 | hypothetical protein | - |
| QJP66_RS02665 () | 528434..528610 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| QJP66_RS02670 () | 528622..529074 | - | 453 | WP_021527593.1 | hypothetical protein | - |
| QJP66_RS02675 () | 529078..529518 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| QJP66_RS02680 () | 529529..530674 | - | 1146 | WP_021527594.1 | DUF3383 family protein | - |
| QJP66_RS02685 () | 530678..531241 | - | 564 | WP_021527595.1 | hypothetical protein | - |
| QJP66_RS02690 () | 531216..531605 | - | 390 | WP_021527596.1 | hypothetical protein | - |
| QJP66_RS02695 () | 531592..532146 | - | 555 | WP_021527597.1 | hypothetical protein | - |
| QJP66_RS02700 () | 532143..532550 | - | 408 | WP_000042171.1 | DUF4054 domain-containing protein | - |
| QJP66_RS02705 () | 532516..532884 | - | 369 | WP_021527598.1 | hypothetical protein | - |
| QJP66_RS02710 () | 532925..533866 | - | 942 | WP_000627487.1 | DUF2184 domain-containing protein | - |
| QJP66_RS02715 () | 533878..534384 | - | 507 | WP_001066732.1 | hypothetical protein | - |
| QJP66_RS02720 () | 534388..535608 | - | 1221 | WP_021527599.1 | DUF2213 domain-containing protein | - |
| QJP66_RS02725 () | 535623..536357 | - | 735 | WP_149011642.1 | phage minor head protein | - |
| QJP66_RS02730 () | 536248..537714 | - | 1467 | WP_001551494.1 | DUF1073 domain-containing protein | - |
| QJP66_RS02735 () | 537714..539336 | - | 1623 | WP_021527601.1 | hypothetical protein | - |
| QJP66_RS02740 () | 539339..539890 | - | 552 | WP_001218996.1 | terminase small subunit | - |
| QJP66_RS02745 () | 539910..540458 | + | 549 | WP_000762846.1 | hypothetical protein | - |
| QJP66_RS02750 () | 540591..540776 | - | 186 | WP_000113285.1 | hypothetical protein | - |
| QJP66_RS02755 () | 540757..541035 | - | 279 | WP_173671027.1 | hypothetical protein | - |
| QJP66_RS02760 () | 540920..541312 | - | 393 | WP_001311799.1 | DUF2570 domain-containing protein | - |
| QJP66_RS02765 () | 541296..541772 | - | 477 | WP_001194115.1 | glycoside hydrolase family protein | - |
| QJP66_RS02770 () | 541776..542117 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| QJP66_RS02775 () | 542334..542495 | + | 162 | WP_001419877.1 | hypothetical protein | - |
| QJP66_RS02780 () | 542464..543033 | - | 570 | WP_021527603.1 | hypothetical protein | - |
| QJP66_RS02785 () | 543255..543797 | - | 543 | WP_001533369.1 | DUF1133 family protein | - |
| QJP66_RS02790 () | 543794..544084 | - | 291 | WP_016236029.1 | DUF1364 domain-containing protein | - |
| QJP66_RS02795 () | 544084..544683 | - | 600 | WP_021527604.1 | DUF1367 family protein | - |
| QJP66_RS02800 () | 545243..545398 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP66_RS02805 () | 546213..546305 | - | 93 | Protein_557 | DUF551 domain-containing protein | - |
| QJP66_RS02810 () | 546552..546677 | - | 126 | Protein_558 | hypothetical protein | - |
| QJP66_RS02815 () | 546688..546951 | - | 264 | WP_021527607.1 | hypothetical protein | - |
| QJP66_RS02820 () | 546953..547444 | - | 492 | WP_021527608.1 | hypothetical protein | - |
| QJP66_RS02825 () | 547447..547923 | - | 477 | WP_021527609.1 | hypothetical protein | - |
| QJP66_RS02830 () | 548019..548375 | - | 357 | WP_021527610.1 | hypothetical protein | - |
| QJP66_RS02835 () | 548433..548855 | - | 423 | WP_021527611.1 | DUF977 family protein | - |
| QJP66_RS02840 () | 548871..549632 | - | 762 | WP_021527612.1 | DUF1627 domain-containing protein | - |
| QJP66_RS02845 () | 549655..550401 | - | 747 | WP_000788992.1 | ATP-binding protein | - |
| QJP66_RS02850 () | 550408..551196 | - | 789 | WP_016236034.1 | hypothetical protein | - |
| QJP66_RS02855 () | 551274..551696 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| QJP66_RS02860 () | 551693..551935 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| QJP66_RS02865 () | 552032..552451 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| QJP66_RS02870 () | 552751..552969 | + | 219 | WP_000232638.1 | hypothetical protein | - |
| QJP66_RS02875 () | 552935..553129 | - | 195 | WP_001419881.1 | hypothetical protein | - |
| QJP66_RS02880 () | 553526..553747 | + | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| QJP66_RS02885 () | 553747..553917 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| QJP66_RS02890 () | 553992..554267 | + | 276 | WP_001452559.1 | hypothetical protein | - |
| QJP66_RS02895 () | 554366..556999 | + | 2634 | WP_021527613.1 | exodeoxyribonuclease VIII | - |
| QJP66_RS02900 () | 556992..557801 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| QJP66_RS02905 () | 557858..558052 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| QJP66_RS02910 () | 558045..558233 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 558051..558229 | - | 179 | NuclAT_0 | - | - |
| - () | 558051..558229 | - | 179 | NuclAT_0 | - | - |
| - () | 558051..558229 | - | 179 | NuclAT_0 | - | - |
| - () | 558051..558229 | - | 179 | NuclAT_0 | - | - |
| QJP66_RS02915 () | 558340..558621 | + | 282 | WP_001311878.1 | excisionase | - |
| QJP66_RS02920 () | 558587..559663 | + | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| - | 559794..560025 | + | 232 | - | - | Antitoxin Detail |
| - | 559795..559897 | - | 103 | - | - | Toxin Detail |
| QJP66_RS02925 () | 560055..560396 | - | 342 | WP_000976472.1 | YebY family protein | - |
| QJP66_RS02930 () | 560409..561281 | - | 873 | WP_000879317.1 | copper homeostasis membrane protein CopD | - |
| QJP66_RS02935 () | 561285..561659 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| QJP66_RS02940 () | 561798..562028 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QJP66_RS02945 () | 562130..562786 | + | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QJP66_RS02950 () | 562810..563472 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QJP66_RS02955 () | 563469..565529 | - | 2061 | WP_000936925.1 | oligopeptidase B | - |
| QJP66_RS02960 () | 565738..566397 | - | 660 | WP_000024724.1 | tellurite resistance TerB family protein | - |
| QJP66_RS02965 () | 566724..567080 | - | 357 | WP_001295500.1 | protein YebF | - |
| QJP66_RS02970 () | 567147..567437 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QJP66_RS02975 () | 567571..568749 | + | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QJP66_RS02980 () | 568805..569446 | - | 642 | WP_000800503.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QJP66_RS02985 () | 569483..571294 | - | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|