MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124436 Location: 3365815..3390756 Organism: Escherichia coli strain AVS0790 Replicon: chromosome
Accession: NZ_CP124436 Location: 3365815..3390756 Organism: Escherichia coli strain AVS0790 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP66_RS16555 (3362663) | 3362663..3363382 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP66_RS16560 (3363379) | 3363379..3365010 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP66_RS16565 (3365191) | 3365191..3365421 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP66_RS16570 (3365433) | 3365433..3365705 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP66_RS16575 (3365815) | 3365815..3368352 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| QJP66_RS16580 (3368385) | 3368385..3369077 | - | 693 | WP_000760483.1 | hypothetical protein | VF |
| QJP66_RS16585 (3369142) | 3369142..3369666 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP66_RS16590 (3370067) | 3370067..3373879 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| QJP66_RS16595 (3374777) | 3374777..3375607 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP66_RS16600 (3376763) | 3376763..3380692 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| QJP66_RS16605 (3380906) | 3380906..3381178 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP66_RS16610 (3381406) | 3381406..3381702 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP66_RS16615 (3381730) | 3381730..3381903 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP66_RS16620 (3382022) | 3382022..3383539 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP66_RS16625 (3383776) | 3383776..3385233 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP66_RS16630 (3385292) | 3385292..3387439 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP66_RS16635 (3387519) | 3387519..3388853 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP66_RS16640 (3389219) | 3389219..3390756 | - | 1538 | Protein_3252 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP66_RS16645 (3391016) | 3391016..3391175 | - | 160 | Protein_3253 | integrase | - |
| QJP66_RS16655 (3391555) | 3391555..3392130 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP66_RS16660 (3392167) | 3392167..3393864 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP66_RS16665 (3393840) | 3393840..3394178 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP66_RS16670 (3394294) | 3394294..3395595 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|