MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124424 Location: 3166118..3191059 Organism: Escherichia coli strain AVS0247 Replicon: chromosome
Accession: NZ_CP124424 Location: 3166118..3191059 Organism: Escherichia coli strain AVS0247 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB03_RS15190 (3162966) | 3162966..3163685 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJB03_RS15195 (3163682) | 3163682..3165313 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJB03_RS15200 (3165494) | 3165494..3165724 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB03_RS15205 (3165736) | 3165736..3166008 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB03_RS15210 (3166118) | 3166118..3168655 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJB03_RS15215 (3168688) | 3168688..3169380 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJB03_RS15220 (3169445) | 3169445..3169969 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJB03_RS15225 (3170370) | 3170370..3174182 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJB03_RS15230 (3175080) | 3175080..3175910 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB03_RS15235 (3177066) | 3177066..3180995 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJB03_RS15240 (3181209) | 3181209..3181481 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJB03_RS15245 (3181709) | 3181709..3182005 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB03_RS15250 (3182033) | 3182033..3182206 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB03_RS15255 (3182325) | 3182325..3183842 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB03_RS15260 (3184079) | 3184079..3185536 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB03_RS15265 (3185595) | 3185595..3187742 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB03_RS15270 (3187822) | 3187822..3189156 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB03_RS15275 (3189522) | 3189522..3191059 | - | 1538 | Protein_2980 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB03_RS15280 (3191319) | 3191319..3191478 | - | 160 | Protein_2981 | integrase | - |
| QJB03_RS15290 (3191858) | 3191858..3192433 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJB03_RS15295 (3192470) | 3192470..3194167 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJB03_RS15300 (3194143) | 3194143..3194481 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJB03_RS15305 (3194597) | 3194597..3195898 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|