MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124415 Location: 3206920..3231861 Organism: Escherichia coli strain AVS0223 Replicon: chromosome
Accession: NZ_CP124415 Location: 3206920..3231861 Organism: Escherichia coli strain AVS0223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP60_RS15365 (3203768) | 3203768..3204487 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP60_RS15370 (3204484) | 3204484..3206115 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP60_RS15375 (3206296) | 3206296..3206526 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP60_RS15380 (3206538) | 3206538..3206810 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP60_RS15385 (3206920) | 3206920..3209457 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP60_RS15390 (3209490) | 3209490..3210182 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP60_RS15395 (3210247) | 3210247..3210771 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP60_RS15400 (3211172) | 3211172..3214984 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP60_RS15405 (3215882) | 3215882..3216712 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP60_RS15410 (3217868) | 3217868..3221797 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP60_RS15415 (3222011) | 3222011..3222283 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP60_RS15420 (3222511) | 3222511..3222807 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP60_RS15425 (3222835) | 3222835..3223008 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP60_RS15430 (3223127) | 3223127..3224644 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP60_RS15435 (3224881) | 3224881..3226338 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP60_RS15440 (3226397) | 3226397..3228544 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP60_RS15445 (3228624) | 3228624..3229958 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP60_RS15450 (3230324) | 3230324..3231861 | - | 1538 | Protein_3018 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP60_RS15455 (3232121) | 3232121..3232280 | - | 160 | Protein_3019 | integrase | - |
| QJP60_RS15465 (3232660) | 3232660..3233235 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP60_RS15470 (3233272) | 3233272..3234969 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP60_RS15475 (3234945) | 3234945..3235283 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP60_RS15480 (3235399) | 3235399..3236700 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|