MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124400 Location: 3220093..3245034 Organism: Escherichia coli strain AVS0528 Replicon: chromosome
Accession: NZ_CP124400 Location: 3220093..3245034 Organism: Escherichia coli strain AVS0528 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP80_RS15405 (3216941) | 3216941..3217660 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP80_RS15410 (3217657) | 3217657..3219288 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP80_RS15415 (3219469) | 3219469..3219699 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP80_RS15420 (3219711) | 3219711..3219983 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP80_RS15425 (3220093) | 3220093..3222630 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP80_RS15430 (3222663) | 3222663..3223355 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP80_RS15435 (3223420) | 3223420..3223944 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP80_RS15440 (3224345) | 3224345..3228157 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP80_RS15445 (3229055) | 3229055..3229885 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP80_RS15450 (3231041) | 3231041..3234970 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP80_RS15455 (3235184) | 3235184..3235456 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP80_RS15460 (3235684) | 3235684..3235980 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP80_RS15465 (3236008) | 3236008..3236181 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP80_RS15470 (3236300) | 3236300..3237817 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP80_RS15475 (3238054) | 3238054..3239511 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP80_RS15480 (3239570) | 3239570..3241717 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP80_RS15485 (3241797) | 3241797..3243131 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP80_RS15490 (3243497) | 3243497..3245034 | - | 1538 | Protein_3025 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP80_RS15495 (3245294) | 3245294..3245453 | - | 160 | Protein_3026 | integrase | - |
| QJP80_RS15505 (3245833) | 3245833..3246408 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP80_RS15510 (3246445) | 3246445..3248142 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP80_RS15515 (3248118) | 3248118..3248456 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP80_RS15520 (3248572) | 3248572..3249873 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|